Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PPP4R3AQ6IN85 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 CRYGEP-201ENST00000412192 528 ntBASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 HCG4B-203ENST00000450128 991 ntBASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 MIR4751-201ENST00000578027 74 ntBASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 AC080080.1-201ENST00000625121 2420 ntBASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PPP4R3AQ6IN85 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 IGLL3P-201ENST00000412472 434 ntBASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 FAM185BP-201ENST00000443595 716 ntBASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP4R3AQ6IN85 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 AC106820.2-201ENST00000563775 3264 ntBASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP4R3AQ6IN85 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms