Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 MKNK2P1-201ENST00000437526 628 ntBASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 SNHG9-202ENST00000564014 471 ntBASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 OR6D1P-203ENST00000641209 4860 ntBASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEF17Q5VTA0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 AP002472.1-201ENST00000577490 586 ntBASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 AC092902.6-201ENST00000641783 218 ntBASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 AC129492.6-201ENST00000611383 1305 ntBASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEF17Q5VTA0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 PMS2P2-201ENST00000425039 1128 ntBASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 EGFEM1P-202ENST00000431685 1563 ntBASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 AC068137.2-201ENST00000605408 478 ntBASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 REXO1L3P-201ENST00000622202 1288 ntBASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEF17Q5VTA0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.14■□□□□ 0.18
PRAMEF17Q5VTA0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF17Q5VTA0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PRAMEF17Q5VTA0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF17Q5VTA0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PRAMEF17Q5VTA0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEF17Q5VTA0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PRAMEF17Q5VTA0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms