Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 CNN2P11-201ENST00000429351 262 ntBASIC14.85□□□□□ -0.03
FREM1Q5H8C1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 AC092183.1-201ENST00000469884 875 ntBASIC14.85□□□□□ -0.03
FREM1Q5H8C1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 AC005829.1-201ENST00000570002 483 ntBASIC14.85□□□□□ -0.03
FREM1Q5H8C1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 AC091812.2-201ENST00000619081 385 ntBASIC14.85□□□□□ -0.03
FREM1Q5H8C1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FREM1Q5H8C1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 RNU1-129P-201ENST00000384064 167 ntBASIC14.84□□□□□ -0.03
FREM1Q5H8C1 KRT18P32-201ENST00000424695 1287 ntBASIC14.84□□□□□ -0.03
FREM1Q5H8C1 FAM58CP-201ENST00000435741 640 ntBASIC14.84□□□□□ -0.03
FREM1Q5H8C1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 U1.21-201ENST00000580816 167 ntBASIC14.84□□□□□ -0.03
FREM1Q5H8C1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 AC092171.3-201ENST00000610122 2651 ntBASIC14.84□□□□□ -0.03
FREM1Q5H8C1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 SPDYE11-202ENST00000450699 704 ntBASIC14.84□□□□□ -0.03
FREM1Q5H8C1 AP000344.2-201ENST00000512987 629 ntBASIC14.84□□□□□ -0.03
FREM1Q5H8C1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 SPDYE9P-201ENST00000570642 692 ntBASIC14.84□□□□□ -0.03
FREM1Q5H8C1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 SPDYE10P-202ENST00000612005 668 ntBASIC14.84□□□□□ -0.03
FREM1Q5H8C1 SPDYE8P-202ENST00000612377 668 ntBASIC14.84□□□□□ -0.03
FREM1Q5H8C1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FREM1Q5H8C1 AC012569.1-201ENST00000591191 1524 ntBASIC14.84□□□□□ -0.03
FREM1Q5H8C1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
FREM1Q5H8C1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
FREM1Q5H8C1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
FREM1Q5H8C1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
FREM1Q5H8C1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
FREM1Q5H8C1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
FREM1Q5H8C1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FREM1Q5H8C1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
FREM1Q5H8C1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.83□□□□□ -0.04
FREM1Q5H8C1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FREM1Q5H8C1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.83□□□□□ -0.04
FREM1Q5H8C1 TUBB8P12-201ENST00000308911 1335 ntBASIC14.83□□□□□ -0.04
FREM1Q5H8C1 TUBB7P-202ENST00000428444 1305 ntBASIC14.83□□□□□ -0.04
FREM1Q5H8C1 TUBB8P7-204ENST00000567960 1332 ntBASIC14.83□□□□□ -0.04
FREM1Q5H8C1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
FREM1Q5H8C1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
FREM1Q5H8C1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FREM1Q5H8C1 WASH6P-202ENST00000359512 1437 ntBASIC14.83□□□□□ -0.04
FREM1Q5H8C1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FREM1Q5H8C1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.83□□□□□ -0.04
FREM1Q5H8C1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.83□□□□□ -0.04
FREM1Q5H8C1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms