Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 HLA-A-202ENST00000376806 1854 ntBASIC16.21■□□□□ 0.19
SPIN4Q56A73 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 AC004706.3-202ENST00000621574 984 ntBASIC16.21■□□□□ 0.19
SPIN4Q56A73 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SPIN4Q56A73 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPIN4Q56A73 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SPIN4Q56A73 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SPIN4Q56A73 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SPIN4Q56A73 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
SPIN4Q56A73 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 HLA-J-202ENST00000469281 1241 ntBASIC16.2■□□□□ 0.18
SPIN4Q56A73 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.2■□□□□ 0.18
SPIN4Q56A73 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPIN4Q56A73 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPIN4Q56A73 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.19■□□□□ 0.18
SPIN4Q56A73 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SPIN4Q56A73 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.19■□□□□ 0.18
SPIN4Q56A73 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SPIN4Q56A73 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPIN4Q56A73 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SPIN4Q56A73 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPIN4Q56A73 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.19■□□□□ 0.18
SPIN4Q56A73 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPIN4Q56A73 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SPIN4Q56A73 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SPIN4Q56A73 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.19■□□□□ 0.18
SPIN4Q56A73 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms