Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PPP3CAQ08209 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP3CAQ08209 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.3■□□□□ 0.52
PPP3CAQ08209 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PPP3CAQ08209 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.3■□□□□ 0.52
PPP3CAQ08209 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP3CAQ08209 AC006277.1-201ENST00000624348 1610 ntBASIC18.3■□□□□ 0.52
PPP3CAQ08209 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP3CAQ08209 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PPP3CAQ08209 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.3■□□□□ 0.52
PPP3CAQ08209 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP3CAQ08209 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPP3CAQ08209 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP3CAQ08209 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP3CAQ08209 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PPP3CAQ08209 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PPP3CAQ08209 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP3CAQ08209 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PPP3CAQ08209 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP3CAQ08209 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 PMS2P1-201ENST00000431037 1228 ntBASIC18.29■□□□□ 0.52
PPP3CAQ08209 AC079776.4-201ENST00000511039 504 ntBASIC18.29■□□□□ 0.52
PPP3CAQ08209 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 AP002490.2-201ENST00000524791 560 ntBASIC18.29■□□□□ 0.52
PPP3CAQ08209 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 MIR4492-201ENST00000581627 80 ntBASIC18.29■□□□□ 0.52
PPP3CAQ08209 MPDU1-223ENST00000582151 728 ntBASIC18.29■□□□□ 0.52
PPP3CAQ08209 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP3CAQ08209 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP3CAQ08209 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPP3CAQ08209 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PPP3CAQ08209 HLA-A-202ENST00000376806 1854 ntBASIC18.29■□□□□ 0.52
PPP3CAQ08209 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP3CAQ08209 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 SNX33P1-201ENST00000592116 1762 ntBASIC18.28■□□□□ 0.52
PPP3CAQ08209 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 AC026396.1-201ENST00000419388 421 ntBASIC18.28■□□□□ 0.52
PPP3CAQ08209 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 AC013467.2-201ENST00000605472 835 ntBASIC18.28■□□□□ 0.52
PPP3CAQ08209 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
PPP3CAQ08209 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPP3CAQ08209 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 AC129492.6-201ENST00000611383 1305 ntBASIC18.27■□□□□ 0.52
PPP3CAQ08209 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP3CAQ08209 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP3CAQ08209 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PPP3CAQ08209 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP3CAQ08209 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.27■□□□□ 0.52
PPP3CAQ08209 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms