Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDR2Q01850 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CDR2Q01850 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDR2Q01850 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDR2Q01850 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDR2Q01850 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDR2Q01850 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CDR2Q01850 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CDR2Q01850 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.11■□□□□ 0.49
CDR2Q01850 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.11■□□□□ 0.49
CDR2Q01850 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDR2Q01850 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.11■□□□□ 0.49
CDR2Q01850 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDR2Q01850 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.11■□□□□ 0.49
CDR2Q01850 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDR2Q01850 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDR2Q01850 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.11■□□□□ 0.49
CDR2Q01850 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDR2Q01850 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.11■□□□□ 0.49
CDR2Q01850 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDR2Q01850 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDR2Q01850 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDR2Q01850 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.11■□□□□ 0.49
CDR2Q01850 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CDR2Q01850 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDR2Q01850 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDR2Q01850 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDR2Q01850 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.1■□□□□ 0.49
CDR2Q01850 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDR2Q01850 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDR2Q01850 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDR2Q01850 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.1■□□□□ 0.49
CDR2Q01850 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.1■□□□□ 0.49
CDR2Q01850 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.1■□□□□ 0.49
CDR2Q01850 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.1■□□□□ 0.49
CDR2Q01850 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDR2Q01850 AL391256.1-201ENST00000443260 1855 ntBASIC18.1■□□□□ 0.49
CDR2Q01850 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.1■□□□□ 0.49
CDR2Q01850 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.1■□□□□ 0.49
CDR2Q01850 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CDR2Q01850 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDR2Q01850 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.1■□□□□ 0.49
CDR2Q01850 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDR2Q01850 PAWRP1-201ENST00000451083 565 ntBASIC18.1■□□□□ 0.49
CDR2Q01850 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.1■□□□□ 0.49
CDR2Q01850 UNC93B7-201ENST00000509439 705 ntBASIC18.1■□□□□ 0.49
CDR2Q01850 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDR2Q01850 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.1■□□□□ 0.49
CDR2Q01850 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDR2Q01850 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDR2Q01850 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.1■□□□□ 0.49
CDR2Q01850 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDR2Q01850 AL603756.1-201ENST00000606511 2163 ntBASIC18.1■□□□□ 0.49
CDR2Q01850 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CDR2Q01850 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.09■□□□□ 0.49
CDR2Q01850 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 LINC00895-201ENST00000629028 1637 ntBASIC18.09■□□□□ 0.49
CDR2Q01850 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.09■□□□□ 0.49
CDR2Q01850 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.09■□□□□ 0.49
CDR2Q01850 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.09■□□□□ 0.49
CDR2Q01850 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDR2Q01850 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.09■□□□□ 0.49
CDR2Q01850 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.09■□□□□ 0.49
CDR2Q01850 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.09■□□□□ 0.49
CDR2Q01850 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.09■□□□□ 0.49
CDR2Q01850 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.09■□□□□ 0.49
CDR2Q01850 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.09■□□□□ 0.49
CDR2Q01850 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.09■□□□□ 0.49
CDR2Q01850 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.09■□□□□ 0.49
CDR2Q01850 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.09■□□□□ 0.49
CDR2Q01850 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.09■□□□□ 0.49
CDR2Q01850 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.09■□□□□ 0.49
CDR2Q01850 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.09■□□□□ 0.49
CDR2Q01850 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDR2Q01850 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CDR2Q01850 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.09■□□□□ 0.49
CDR2Q01850 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDR2Q01850 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
CDR2Q01850 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDR2Q01850 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDR2Q01850 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDR2Q01850 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CDR2Q01850 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDR2Q01850 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.08■□□□□ 0.49
CDR2Q01850 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.08■□□□□ 0.48
CDR2Q01850 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDR2Q01850 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms