Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEP78395 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEP78395 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEP78395 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEP78395 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEP78395 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEP78395 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEP78395 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEP78395 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.15■□□□□ 0.34
PRAMEP78395 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.15■□□□□ 0.34
PRAMEP78395 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEP78395 KRT18P56-201ENST00000507275 550 ntBASIC17.15■□□□□ 0.34
PRAMEP78395 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.15■□□□□ 0.34
PRAMEP78395 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.15■□□□□ 0.34
PRAMEP78395 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.15■□□□□ 0.34
PRAMEP78395 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.15■□□□□ 0.34
PRAMEP78395 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEP78395 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.15■□□□□ 0.34
PRAMEP78395 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEP78395 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEP78395 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.15■□□□□ 0.34
PRAMEP78395 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEP78395 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PRAMEP78395 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.14■□□□□ 0.33
PRAMEP78395 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEP78395 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEP78395 SAPCD2P3-201ENST00000455031 850 ntBASIC17.14■□□□□ 0.33
PRAMEP78395 SCARNA2-201ENST00000458748 420 ntBASIC17.14■□□□□ 0.33
PRAMEP78395 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PRAMEP78395 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PRAMEP78395 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.14■□□□□ 0.33
PRAMEP78395 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEP78395 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEP78395 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PRAMEP78395 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PRAMEP78395 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PRAMEP78395 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEP78395 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEP78395 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEP78395 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PRAMEP78395 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEP78395 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEP78395 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PRAMEP78395 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEP78395 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.13■□□□□ 0.33
PRAMEP78395 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PRAMEP78395 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.13■□□□□ 0.33
PRAMEP78395 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 1519.5 ms