Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.39■■□□□ 1.01
KCNQ4P56696 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
KCNQ4P56696 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KCNQ4P56696 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.39■■□□□ 1.01
KCNQ4P56696 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNQ4P56696 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNQ4P56696 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNQ4P56696 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNQ4P56696 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.38■■□□□ 1.01
KCNQ4P56696 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNQ4P56696 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
KCNQ4P56696 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KCNQ4P56696 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC21.38■■□□□ 1.01
KCNQ4P56696 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
KCNQ4P56696 DOC2GP-202ENST00000514950 1163 ntBASIC21.38■■□□□ 1.01
KCNQ4P56696 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
KCNQ4P56696 AC044860.1-202ENST00000559481 777 ntBASIC21.38■■□□□ 1.01
KCNQ4P56696 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.38■■□□□ 1.01
KCNQ4P56696 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC21.38■■□□□ 1.01
KCNQ4P56696 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
KCNQ4P56696 AP001350.2-201ENST00000625104 1094 ntBASIC21.38■■□□□ 1.01
KCNQ4P56696 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNQ4P56696 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
KCNQ4P56696 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
KCNQ4P56696 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
KCNQ4P56696 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.38■■□□□ 1.01
KCNQ4P56696 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.38■■□□□ 1.01
KCNQ4P56696 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
KCNQ4P56696 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KCNQ4P56696 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KCNQ4P56696 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNQ4P56696 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KCNQ4P56696 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.37■■□□□ 1.01
KCNQ4P56696 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.37■■□□□ 1.01
KCNQ4P56696 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
KCNQ4P56696 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNQ4P56696 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
KCNQ4P56696 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.37■■□□□ 1.01
KCNQ4P56696 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.37■■□□□ 1.01
KCNQ4P56696 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC21.37■■□□□ 1.01
KCNQ4P56696 AL512361.1-201ENST00000554200 418 ntBASIC21.37■■□□□ 1.01
KCNQ4P56696 AL079307.3-201ENST00000556114 283 ntBASIC21.37■■□□□ 1.01
KCNQ4P56696 AL512343.1-201ENST00000605837 169 ntBASIC21.37■■□□□ 1.01
KCNQ4P56696 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNQ4P56696 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
KCNQ4P56696 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
KCNQ4P56696 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNQ4P56696 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.37■■□□□ 1.01
KCNQ4P56696 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.37■■□□□ 1.01
KCNQ4P56696 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KCNQ4P56696 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.37■■□□□ 1.01
KCNQ4P56696 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNQ4P56696 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNQ4P56696 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNQ4P56696 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNQ4P56696 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KCNQ4P56696 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.37■■□□□ 1.01
KCNQ4P56696 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KCNQ4P56696 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.36■■□□□ 1.01
KCNQ4P56696 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
KCNQ4P56696 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.36■■□□□ 1.01
KCNQ4P56696 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC21.36■■□□□ 1.01
KCNQ4P56696 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 OSM-203ENST00000403463 464 ntTSL 3 BASIC21.36■■□□□ 1.01
KCNQ4P56696 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC21.36■■□□□ 1.01
KCNQ4P56696 CD81-207ENST00000481687 890 ntTSL 2 BASIC21.36■■□□□ 1.01
KCNQ4P56696 GLI4-203ENST00000517468 963 ntTSL 5 BASIC21.36■■□□□ 1.01
KCNQ4P56696 SNX29P1-201ENST00000548357 1007 ntBASIC21.36■■□□□ 1.01
KCNQ4P56696 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.36■■□□□ 1.01
KCNQ4P56696 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.36■■□□□ 1.01
KCNQ4P56696 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 AL023806.1-201ENST00000603994 1649 ntBASIC21.36■■□□□ 1.01
KCNQ4P56696 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KCNQ4P56696 EGFEM1P-202ENST00000431685 1563 ntBASIC21.36■■□□□ 1.01
KCNQ4P56696 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
KCNQ4P56696 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.35■■□□□ 1.01
KCNQ4P56696 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
KCNQ4P56696 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNQ4P56696 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.35■■□□□ 1.01
KCNQ4P56696 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNQ4P56696 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.35■■□□□ 1.01
KCNQ4P56696 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNQ4P56696 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KCNQ4P56696 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
KCNQ4P56696 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.35■■□□□ 1.01
KCNQ4P56696 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms