Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LBX1P52954 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.86■□□□□ 0.61
LBX1P52954 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.86■□□□□ 0.61
LBX1P52954 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LBX1P52954 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LBX1P52954 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LBX1P52954 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.86■□□□□ 0.61
LBX1P52954 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LBX1P52954 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.86■□□□□ 0.61
LBX1P52954 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LBX1P52954 LINC00895-201ENST00000629028 1637 ntBASIC18.86■□□□□ 0.61
LBX1P52954 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LBX1P52954 AC138028.6-201ENST00000616106 1482 ntBASIC18.86■□□□□ 0.61
LBX1P52954 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.86■□□□□ 0.61
LBX1P52954 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LBX1P52954 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LBX1P52954 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LBX1P52954 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LBX1P52954 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.86■□□□□ 0.61
LBX1P52954 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.86■□□□□ 0.61
LBX1P52954 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.86■□□□□ 0.61
LBX1P52954 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.86■□□□□ 0.61
LBX1P52954 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.86■□□□□ 0.61
LBX1P52954 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.86■□□□□ 0.61
LBX1P52954 SCARNA20.5-201ENST00000516991 142 ntBASIC18.86■□□□□ 0.61
LBX1P52954 DUX4L45-201ENST00000566406 1057 ntBASIC18.86■□□□□ 0.61
LBX1P52954 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LBX1P52954 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.85■□□□□ 0.61
LBX1P52954 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.85■□□□□ 0.61
LBX1P52954 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.85■□□□□ 0.61
LBX1P52954 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.85■□□□□ 0.61
LBX1P52954 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.85■□□□□ 0.61
LBX1P52954 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LBX1P52954 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LBX1P52954 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LBX1P52954 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LBX1P52954 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.85■□□□□ 0.61
LBX1P52954 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.85■□□□□ 0.61
LBX1P52954 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.85■□□□□ 0.61
LBX1P52954 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LBX1P52954 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
LBX1P52954 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.85■□□□□ 0.61
LBX1P52954 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.85■□□□□ 0.61
LBX1P52954 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LBX1P52954 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.85■□□□□ 0.61
LBX1P52954 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.85■□□□□ 0.61
LBX1P52954 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.85■□□□□ 0.61
LBX1P52954 MIR4492-201ENST00000581627 80 ntBASIC18.85■□□□□ 0.61
LBX1P52954 MIR4750-201ENST00000584564 56 ntBASIC18.85■□□□□ 0.61
LBX1P52954 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.85■□□□□ 0.61
LBX1P52954 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.85■□□□□ 0.61
LBX1P52954 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.85■□□□□ 0.61
LBX1P52954 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LBX1P52954 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.85■□□□□ 0.61
LBX1P52954 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.85■□□□□ 0.61
LBX1P52954 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LBX1P52954 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LBX1P52954 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LBX1P52954 AC131009.4-201ENST00000624048 1740 ntBASIC18.85■□□□□ 0.61
LBX1P52954 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LBX1P52954 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LBX1P52954 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.85■□□□□ 0.61
LBX1P52954 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LBX1P52954 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.85■□□□□ 0.61
LBX1P52954 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.84■□□□□ 0.61
LBX1P52954 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.84■□□□□ 0.61
LBX1P52954 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 TOP3BP1-201ENST00000420768 1380 ntBASIC18.84■□□□□ 0.61
LBX1P52954 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.84■□□□□ 0.61
LBX1P52954 AC073439.1-201ENST00000624121 1774 ntBASIC18.84■□□□□ 0.61
LBX1P52954 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.84■□□□□ 0.61
LBX1P52954 TIMM17BP1-201ENST00000545713 516 ntBASIC18.84■□□□□ 0.61
LBX1P52954 CHMP4BP1-201ENST00000556017 588 ntBASIC18.84■□□□□ 0.61
LBX1P52954 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.84■□□□□ 0.61
LBX1P52954 AC133539.2-201ENST00000604757 467 ntBASIC18.84■□□□□ 0.61
LBX1P52954 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.84■□□□□ 0.61
LBX1P52954 HLA-C-210ENST00000640219 976 ntBASIC18.84■□□□□ 0.61
LBX1P52954 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.84■□□□□ 0.61
LBX1P52954 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.84■□□□□ 0.61
LBX1P52954 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.84■□□□□ 0.61
LBX1P52954 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LBX1P52954 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LBX1P52954 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LBX1P52954 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LBX1P52954 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LBX1P52954 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.83■□□□□ 0.61
LBX1P52954 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LBX1P52954 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms