Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A2P52657 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A2P52657 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A2P52657 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.37■□□□□ 0.69
GTF2A2P52657 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GTF2A2P52657 KRT8P49-201ENST00000604166 1432 ntBASIC19.37■□□□□ 0.69
GTF2A2P52657 AL021920.2-201ENST00000624828 1351 ntBASIC19.37■□□□□ 0.69
GTF2A2P52657 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
GTF2A2P52657 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GTF2A2P52657 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A2P52657 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.37■□□□□ 0.69
GTF2A2P52657 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.37■□□□□ 0.69
GTF2A2P52657 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.37■□□□□ 0.69
GTF2A2P52657 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.37■□□□□ 0.69
GTF2A2P52657 DFFBP1-201ENST00000433250 979 ntBASIC19.37■□□□□ 0.69
GTF2A2P52657 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A2P52657 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.37■□□□□ 0.69
GTF2A2P52657 AC010336.2-201ENST00000564226 506 ntBASIC19.37■□□□□ 0.69
GTF2A2P52657 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
GTF2A2P52657 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.37■□□□□ 0.69
GTF2A2P52657 AC017083.2-201ENST00000608069 979 ntBASIC19.37■□□□□ 0.69
GTF2A2P52657 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.37■□□□□ 0.69
GTF2A2P52657 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.37■□□□□ 0.69
GTF2A2P52657 AC004840.1-201ENST00000636359 365 ntBASIC19.37■□□□□ 0.69
GTF2A2P52657 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.37■□□□□ 0.69
GTF2A2P52657 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A2P52657 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.37■□□□□ 0.69
GTF2A2P52657 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.37■□□□□ 0.69
GTF2A2P52657 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
GTF2A2P52657 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A2P52657 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.37■□□□□ 0.69
GTF2A2P52657 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A2P52657 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A2P52657 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.36■□□□□ 0.69
GTF2A2P52657 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A2P52657 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A2P52657 AL391825.1-201ENST00000457671 1364 ntBASIC19.36■□□□□ 0.69
GTF2A2P52657 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GTF2A2P52657 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GTF2A2P52657 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A2P52657 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A2P52657 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.36■□□□□ 0.69
GTF2A2P52657 FAM220BP-201ENST00000377689 816 ntBASIC19.36■□□□□ 0.69
GTF2A2P52657 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
GTF2A2P52657 AC087499.6-201ENST00000411576 835 ntBASIC19.36■□□□□ 0.69
GTF2A2P52657 AP006294.1-201ENST00000415407 339 ntBASIC19.36■□□□□ 0.69
GTF2A2P52657 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GTF2A2P52657 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A2P52657 INE1-201ENST00000456273 945 ntBASIC19.36■□□□□ 0.69
GTF2A2P52657 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A2P52657 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.36■□□□□ 0.69
GTF2A2P52657 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A2P52657 MIR4492-201ENST00000581627 80 ntBASIC19.36■□□□□ 0.69
GTF2A2P52657 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.36■□□□□ 0.69
GTF2A2P52657 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.36■□□□□ 0.69
GTF2A2P52657 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.36■□□□□ 0.69
GTF2A2P52657 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A2P52657 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A2P52657 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.36■□□□□ 0.69
GTF2A2P52657 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A2P52657 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.36■□□□□ 0.69
GTF2A2P52657 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.36■□□□□ 0.69
GTF2A2P52657 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF2A2P52657 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A2P52657 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A2P52657 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.35■□□□□ 0.69
GTF2A2P52657 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF2A2P52657 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A2P52657 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
GTF2A2P52657 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF2A2P52657 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
GTF2A2P52657 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A2P52657 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A2P52657 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A2P52657 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF2A2P52657 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
GTF2A2P52657 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.35■□□□□ 0.69
GTF2A2P52657 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.35■□□□□ 0.69
GTF2A2P52657 DGCR5-201ENST00000399539 862 ntBASIC19.35■□□□□ 0.69
GTF2A2P52657 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
GTF2A2P52657 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.35■□□□□ 0.69
GTF2A2P52657 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.35■□□□□ 0.69
GTF2A2P52657 RN7SL752P-201ENST00000463779 287 ntBASIC19.35■□□□□ 0.69
GTF2A2P52657 AC135586.1-201ENST00000539323 574 ntBASIC19.35■□□□□ 0.69
GTF2A2P52657 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF2A2P52657 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.35■□□□□ 0.69
GTF2A2P52657 SPTSSB-204ENST00000617024 1292 ntBASIC19.35■□□□□ 0.69
GTF2A2P52657 AL162274.1-201ENST00000617191 1098 ntBASIC19.35■□□□□ 0.69
GTF2A2P52657 IGHV3-72-202ENST00000621503 303 ntBASIC19.35■□□□□ 0.69
GTF2A2P52657 AC133963.1-201ENST00000504166 1679 ntBASIC19.35■□□□□ 0.69
GTF2A2P52657 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A2P52657 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A2P52657 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF2A2P52657 BTBD7P1-201ENST00000447253 1453 ntBASIC19.35■□□□□ 0.69
GTF2A2P52657 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A2P52657 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
GTF2A2P52657 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GTF2A2P52657 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A2P52657 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.34■□□□□ 0.69
GTF2A2P52657 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms