Protein–RNA interactions for Protein: P49279

SLC11A1, Natural resistance-associated macrophage protein 1, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1P49279 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC11A1P49279 MIR661-201ENST00000384842 89 ntBASIC17.91■□□□□ 0.46
SLC11A1P49279 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC11A1P49279 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.91■□□□□ 0.46
SLC11A1P49279 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC11A1P49279 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC11A1P49279 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC11A1P49279 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC11A1P49279 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC11A1P49279 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC11A1P49279 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC11A1P49279 AC108860.2-201ENST00000562760 2183 ntBASIC17.91■□□□□ 0.46
SLC11A1P49279 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC11A1P49279 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC11A1P49279 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC11A1P49279 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC11A1P49279 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC11A1P49279 CROCCP2-202ENST00000412962 2773 ntBASIC17.91■□□□□ 0.46
SLC11A1P49279 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLC11A1P49279 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC11A1P49279 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC11A1P49279 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC11A1P49279 HTR7P1-202ENST00000624664 4411 ntBASIC17.9■□□□□ 0.46
SLC11A1P49279 LINC02012-201ENST00000608206 1725 ntBASIC17.9■□□□□ 0.46
SLC11A1P49279 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC11A1P49279 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SLC11A1P49279 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SLC11A1P49279 AC236430.1-201ENST00000402231 743 ntBASIC17.9■□□□□ 0.46
SLC11A1P49279 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC11A1P49279 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC11A1P49279 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC11A1P49279 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC11A1P49279 AC069120.2-201ENST00000524091 540 ntBASIC17.9■□□□□ 0.46
SLC11A1P49279 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.9■□□□□ 0.46
SLC11A1P49279 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC11A1P49279 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC11A1P49279 MIR4453-201ENST00000584019 89 ntBASIC17.9■□□□□ 0.46
SLC11A1P49279 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC11A1P49279 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC11A1P49279 AL158211.3-201ENST00000607385 239 ntBASIC17.9■□□□□ 0.46
SLC11A1P49279 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SLC11A1P49279 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC11A1P49279 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC11A1P49279 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC11A1P49279 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC11A1P49279 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
SLC11A1P49279 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC11A1P49279 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.89■□□□□ 0.46
SLC11A1P49279 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SLC11A1P49279 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SLC11A1P49279 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC11A1P49279 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC11A1P49279 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SLC11A1P49279 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC11A1P49279 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC11A1P49279 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC11A1P49279 AC142381.1-201ENST00000426099 345 ntBASIC17.89■□□□□ 0.45
SLC11A1P49279 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.89■□□□□ 0.45
SLC11A1P49279 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC11A1P49279 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.89■□□□□ 0.45
SLC11A1P49279 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC11A1P49279 TSPY16P-201ENST00000449843 468 ntBASIC17.89■□□□□ 0.45
SLC11A1P49279 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC11A1P49279 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SLC11A1P49279 AC097493.3-201ENST00000509725 367 ntBASIC17.89■□□□□ 0.45
SLC11A1P49279 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.89■□□□□ 0.45
SLC11A1P49279 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC11A1P49279 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.89■□□□□ 0.45
SLC11A1P49279 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC11A1P49279 RN7SL204P-201ENST00000582831 262 ntBASIC17.89■□□□□ 0.45
SLC11A1P49279 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC11A1P49279 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC11A1P49279 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SLC11A1P49279 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC11A1P49279 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC11A1P49279 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SLC11A1P49279 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC11A1P49279 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC11A1P49279 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC11A1P49279 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms