Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.97□□□□□ -0.01
THBS4P35443 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.97□□□□□ -0.01
THBS4P35443 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.97□□□□□ -0.01
THBS4P35443 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.97□□□□□ -0.01
THBS4P35443 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.97□□□□□ -0.01
THBS4P35443 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.97□□□□□ -0.01
THBS4P35443 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
THBS4P35443 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
THBS4P35443 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
THBS4P35443 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.97□□□□□ -0.01
THBS4P35443 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 AC005915.1-201ENST00000624912 2018 ntBASIC14.97□□□□□ -0.01
THBS4P35443 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.97□□□□□ -0.01
THBS4P35443 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THBS4P35443 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
THBS4P35443 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
THBS4P35443 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.96□□□□□ -0.01
THBS4P35443 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
THBS4P35443 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.96□□□□□ -0.01
THBS4P35443 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
THBS4P35443 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
THBS4P35443 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
THBS4P35443 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
THBS4P35443 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
THBS4P35443 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
THBS4P35443 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
THBS4P35443 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
THBS4P35443 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.96□□□□□ -0.01
THBS4P35443 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.96□□□□□ -0.01
THBS4P35443 EGFEM1P-202ENST00000431685 1563 ntBASIC14.96□□□□□ -0.01
THBS4P35443 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.96□□□□□ -0.01
THBS4P35443 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.96□□□□□ -0.01
THBS4P35443 SLC25A1P1-201ENST00000528351 927 ntBASIC14.96□□□□□ -0.01
THBS4P35443 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.96□□□□□ -0.01
THBS4P35443 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.96□□□□□ -0.01
THBS4P35443 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
THBS4P35443 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.96□□□□□ -0.01
THBS4P35443 AC006557.2-201ENST00000592985 1240 ntBASIC14.96□□□□□ -0.01
THBS4P35443 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
THBS4P35443 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
THBS4P35443 AF228730.7-201ENST00000641842 219 ntBASIC14.96□□□□□ -0.01
THBS4P35443 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
THBS4P35443 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
THBS4P35443 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
THBS4P35443 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
THBS4P35443 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.96□□□□□ -0.01
THBS4P35443 AC097637.2-201ENST00000624096 1997 ntBASIC14.96□□□□□ -0.01
THBS4P35443 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.96□□□□□ -0.01
THBS4P35443 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.96□□□□□ -0.02
THBS4P35443 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
THBS4P35443 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
THBS4P35443 AC092053.1-201ENST00000605787 1936 ntBASIC14.96□□□□□ -0.02
THBS4P35443 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
THBS4P35443 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
THBS4P35443 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
THBS4P35443 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
THBS4P35443 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 AGGF1P2-201ENST00000426656 2106 ntBASIC14.95□□□□□ -0.02
THBS4P35443 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS4P35443 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.95□□□□□ -0.02
THBS4P35443 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 NCF1C-201ENST00000438382 1427 ntBASIC14.95□□□□□ -0.02
THBS4P35443 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS4P35443 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
THBS4P35443 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS4P35443 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS4P35443 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.95□□□□□ -0.02
THBS4P35443 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS4P35443 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.95□□□□□ -0.02
THBS4P35443 AC098831.1-202ENST00000438821 336 ntBASIC14.95□□□□□ -0.02
THBS4P35443 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.95□□□□□ -0.02
THBS4P35443 RPL13AP23-201ENST00000480739 586 ntBASIC14.95□□□□□ -0.02
THBS4P35443 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.95□□□□□ -0.02
THBS4P35443 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS4P35443 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS4P35443 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms