Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.82■□□□□ 0.44
PDGFRAP16234 RNF216P1-203ENST00000404404 2427 ntBASIC17.82■□□□□ 0.44
PDGFRAP16234 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.82■□□□□ 0.44
PDGFRAP16234 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.82■□□□□ 0.44
PDGFRAP16234 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.82■□□□□ 0.44
PDGFRAP16234 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.82■□□□□ 0.44
PDGFRAP16234 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.82■□□□□ 0.44
PDGFRAP16234 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PDGFRAP16234 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.82■□□□□ 0.44
PDGFRAP16234 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.82■□□□□ 0.44
PDGFRAP16234 RPS15P9-201ENST00000494093 319 ntBASIC17.82■□□□□ 0.44
PDGFRAP16234 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.82■□□□□ 0.44
PDGFRAP16234 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.82■□□□□ 0.44
PDGFRAP16234 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.82■□□□□ 0.44
PDGFRAP16234 AL356488.2-201ENST00000602755 427 ntBASIC17.82■□□□□ 0.44
PDGFRAP16234 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.82■□□□□ 0.44
PDGFRAP16234 MIR1199-201ENST00000621445 119 ntBASIC17.82■□□□□ 0.44
PDGFRAP16234 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.82■□□□□ 0.44
PDGFRAP16234 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PDGFRAP16234 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PDGFRAP16234 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.82■□□□□ 0.44
PDGFRAP16234 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.82■□□□□ 0.44
PDGFRAP16234 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFRAP16234 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PDGFRAP16234 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFRAP16234 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PDGFRAP16234 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PDGFRAP16234 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.81■□□□□ 0.44
PDGFRAP16234 AC098831.1-202ENST00000438821 336 ntBASIC17.81■□□□□ 0.44
PDGFRAP16234 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.81■□□□□ 0.44
PDGFRAP16234 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFRAP16234 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.81■□□□□ 0.44
PDGFRAP16234 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PDGFRAP16234 AGGF1P2-201ENST00000426656 2106 ntBASIC17.81■□□□□ 0.44
PDGFRAP16234 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFRAP16234 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFRAP16234 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PDGFRAP16234 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFRAP16234 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFRAP16234 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFRAP16234 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.8■□□□□ 0.44
PDGFRAP16234 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
PDGFRAP16234 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFRAP16234 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PDGFRAP16234 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.8■□□□□ 0.44
PDGFRAP16234 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.8■□□□□ 0.44
PDGFRAP16234 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFRAP16234 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFRAP16234 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFRAP16234 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFRAP16234 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFRAP16234 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PDGFRAP16234 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFRAP16234 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.8■□□□□ 0.44
PDGFRAP16234 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFRAP16234 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms