Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB40ALP0C0E4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 AC092919.2-201ENST00000623631 1645 ntBASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 AC004461.1-201ENST00000412461 403 ntBASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 TSEN15P1-201ENST00000423257 515 ntBASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 AC005412.3-201ENST00000580309 715 ntBASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB40ALP0C0E4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 AC022145.2-201ENST00000598203 171 ntBASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 AC099398.1-201ENST00000567919 2776 ntBASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40ALP0C0E4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40ALP0C0E4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms