Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOP08100 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RHOP08100 AC015922.1-201ENST00000421102 1152 ntBASIC17.47■□□□□ 0.39
RHOP08100 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.47■□□□□ 0.39
RHOP08100 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.47■□□□□ 0.39
RHOP08100 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.47■□□□□ 0.39
RHOP08100 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.47■□□□□ 0.39
RHOP08100 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.47■□□□□ 0.39
RHOP08100 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.47■□□□□ 0.39
RHOP08100 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.47■□□□□ 0.39
RHOP08100 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOP08100 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.47■□□□□ 0.39
RHOP08100 AF228730.6-201ENST00000641497 218 ntBASIC17.47■□□□□ 0.39
RHOP08100 AC084121.3-201ENST00000641716 218 ntBASIC17.47■□□□□ 0.39
RHOP08100 AC105233.6-201ENST00000642093 218 ntBASIC17.47■□□□□ 0.39
RHOP08100 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOP08100 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOP08100 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RHOP08100 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOP08100 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RHOP08100 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOP08100 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RHOP08100 NOC2LP1-202ENST00000452600 2235 ntBASIC17.47■□□□□ 0.39
RHOP08100 AC134043.2-201ENST00000624206 2238 ntBASIC17.47■□□□□ 0.39
RHOP08100 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOP08100 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOP08100 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RHOP08100 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
RHOP08100 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RHOP08100 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RHOP08100 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RHOP08100 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.46■□□□□ 0.39
RHOP08100 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RHOP08100 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOP08100 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOP08100 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RHOP08100 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOP08100 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOP08100 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.46■□□□□ 0.39
RHOP08100 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.46■□□□□ 0.39
RHOP08100 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.46■□□□□ 0.39
RHOP08100 AC092580.3-201ENST00000430932 139 ntBASIC17.46■□□□□ 0.39
RHOP08100 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOP08100 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOP08100 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.46■□□□□ 0.39
RHOP08100 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.46■□□□□ 0.39
RHOP08100 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.46■□□□□ 0.39
RHOP08100 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
RHOP08100 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOP08100 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOP08100 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.46■□□□□ 0.39
RHOP08100 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOP08100 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.46■□□□□ 0.39
RHOP08100 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
RHOP08100 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.46■□□□□ 0.38
RHOP08100 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.45■□□□□ 0.38
RHOP08100 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.45■□□□□ 0.38
RHOP08100 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.45■□□□□ 0.38
RHOP08100 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RHOP08100 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.45■□□□□ 0.38
RHOP08100 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.45■□□□□ 0.38
RHOP08100 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.45■□□□□ 0.38
RHOP08100 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RHOP08100 AC142381.1-201ENST00000426099 345 ntBASIC17.45■□□□□ 0.38
RHOP08100 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.45■□□□□ 0.38
RHOP08100 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.45■□□□□ 0.38
RHOP08100 FAM207CP-201ENST00000443486 507 ntBASIC17.45■□□□□ 0.38
RHOP08100 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.45■□□□□ 0.38
RHOP08100 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RHOP08100 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.45■□□□□ 0.38
RHOP08100 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.45■□□□□ 0.38
RHOP08100 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.45■□□□□ 0.38
RHOP08100 LINC02560-201ENST00000596379 459 ntBASIC17.45■□□□□ 0.38
RHOP08100 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.45■□□□□ 0.38
RHOP08100 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RHOP08100 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.45■□□□□ 0.38
RHOP08100 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 LINC00895-201ENST00000629028 1637 ntBASIC17.45■□□□□ 0.38
RHOP08100 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.45■□□□□ 0.38
RHOP08100 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
RHOP08100 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.45■□□□□ 0.38
RHOP08100 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.45■□□□□ 0.38
RHOP08100 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.45■□□□□ 0.38
RHOP08100 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHOP08100 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHOP08100 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHOP08100 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms