Protein–RNA interactions for Protein: P01615

IGKV2D-28, Immunoglobulin kappa variable 2D-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28P01615 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
IGKV2D-28P01615 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.27□□□□□ -0.6
IGKV2D-28P01615 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.27□□□□□ -0.6
IGKV2D-28P01615 AC144831.1-201ENST00000573312 2656 ntBASIC11.27□□□□□ -0.6
IGKV2D-28P01615 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
IGKV2D-28P01615 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 ECEL1P3-201ENST00000427961 737 ntBASIC11.27□□□□□ -0.61
IGKV2D-28P01615 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IGKV2D-28P01615 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 AL136379.1-201ENST00000623471 2642 ntBASIC11.26□□□□□ -0.61
IGKV2D-28P01615 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 ALOX12P2-203ENST00000570921 1945 ntBASIC11.26□□□□□ -0.61
IGKV2D-28P01615 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 AL365209.1-201ENST00000624418 6473 ntBASIC11.26□□□□□ -0.61
IGKV2D-28P01615 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.26□□□□□ -0.61
IGKV2D-28P01615 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IGKV2D-28P01615 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms