Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
USP1O94782 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
USP1O94782 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
USP1O94782 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
USP1O94782 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.23■□□□□ 0.35
USP1O94782 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USP1O94782 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
USP1O94782 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 AC079776.2-201ENST00000641154 1609 ntBASIC17.23■□□□□ 0.35
USP1O94782 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
USP1O94782 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.23■□□□□ 0.35
USP1O94782 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.23■□□□□ 0.35
USP1O94782 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.23■□□□□ 0.35
USP1O94782 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.23■□□□□ 0.35
USP1O94782 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.23■□□□□ 0.35
USP1O94782 AP002490.2-201ENST00000524791 560 ntBASIC17.23■□□□□ 0.35
USP1O94782 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.23■□□□□ 0.35
USP1O94782 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.23■□□□□ 0.35
USP1O94782 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
USP1O94782 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
USP1O94782 AC004817.3-201ENST00000602957 2129 ntBASIC17.23■□□□□ 0.35
USP1O94782 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP1O94782 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.23■□□□□ 0.35
USP1O94782 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.22■□□□□ 0.35
USP1O94782 TUBB8P12-201ENST00000308911 1335 ntBASIC17.22■□□□□ 0.35
USP1O94782 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 TUBB7P-202ENST00000428444 1305 ntBASIC17.22■□□□□ 0.35
USP1O94782 TUBB8P7-204ENST00000567960 1332 ntBASIC17.22■□□□□ 0.35
USP1O94782 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 AC097637.2-201ENST00000624096 1997 ntBASIC17.22■□□□□ 0.35
USP1O94782 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.22■□□□□ 0.35
USP1O94782 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 PCDHB17P-201ENST00000539533 2393 ntBASIC17.22■□□□□ 0.35
USP1O94782 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.22■□□□□ 0.35
USP1O94782 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.22■□□□□ 0.35
USP1O94782 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.22■□□□□ 0.35
USP1O94782 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
USP1O94782 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.22■□□□□ 0.35
USP1O94782 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.22■□□□□ 0.35
USP1O94782 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.22■□□□□ 0.35
USP1O94782 KRT126P-201ENST00000549467 1181 ntBASIC17.22■□□□□ 0.35
USP1O94782 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.22■□□□□ 0.35
USP1O94782 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP1O94782 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.22■□□□□ 0.35
USP1O94782 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.21■□□□□ 0.35
USP1O94782 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
USP1O94782 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
USP1O94782 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
USP1O94782 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
USP1O94782 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
USP1O94782 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
USP1O94782 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.21■□□□□ 0.35
USP1O94782 NUS1P2-201ENST00000417358 873 ntBASIC17.21■□□□□ 0.35
USP1O94782 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms