Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACTN4O43707 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ACTN4O43707 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACTN4O43707 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACTN4O43707 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ACTN4O43707 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACTN4O43707 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.04■□□□□ 0.64
ACTN4O43707 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.03■□□□□ 0.64
ACTN4O43707 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ACTN4O43707 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ACTN4O43707 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.03■□□□□ 0.64
ACTN4O43707 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.03■□□□□ 0.64
ACTN4O43707 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.03■□□□□ 0.64
ACTN4O43707 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.03■□□□□ 0.64
ACTN4O43707 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.03■□□□□ 0.64
ACTN4O43707 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
ACTN4O43707 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.03■□□□□ 0.64
ACTN4O43707 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.03■□□□□ 0.64
ACTN4O43707 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.03■□□□□ 0.64
ACTN4O43707 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.03■□□□□ 0.64
ACTN4O43707 AC008608.2-201ENST00000606089 416 ntBASIC19.03■□□□□ 0.64
ACTN4O43707 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.03■□□□□ 0.64
ACTN4O43707 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 PCDH8P1-201ENST00000428983 2773 ntBASIC19.03■□□□□ 0.64
ACTN4O43707 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACTN4O43707 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.02■□□□□ 0.64
ACTN4O43707 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.02■□□□□ 0.64
ACTN4O43707 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.02■□□□□ 0.64
ACTN4O43707 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.02■□□□□ 0.64
ACTN4O43707 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 ALOX12P2-203ENST00000570921 1945 ntBASIC19.02■□□□□ 0.64
ACTN4O43707 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.02■□□□□ 0.64
ACTN4O43707 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.02■□□□□ 0.64
ACTN4O43707 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
ACTN4O43707 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.02■□□□□ 0.64
ACTN4O43707 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.02■□□□□ 0.64
ACTN4O43707 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.02■□□□□ 0.64
ACTN4O43707 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.02■□□□□ 0.64
ACTN4O43707 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.02■□□□□ 0.64
ACTN4O43707 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 MTDHP4-201ENST00000600287 670 ntBASIC19.02■□□□□ 0.64
ACTN4O43707 AC013467.2-201ENST00000605472 835 ntBASIC19.02■□□□□ 0.64
ACTN4O43707 AC004706.3-202ENST00000621574 984 ntBASIC19.02■□□□□ 0.64
ACTN4O43707 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 AC006277.1-201ENST00000624348 1610 ntBASIC19.02■□□□□ 0.64
ACTN4O43707 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ACTN4O43707 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ACTN4O43707 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ACTN4O43707 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ACTN4O43707 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ACTN4O43707 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
ACTN4O43707 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
ACTN4O43707 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.01■□□□□ 0.63
ACTN4O43707 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ACTN4O43707 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.01■□□□□ 0.63
ACTN4O43707 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.01■□□□□ 0.63
ACTN4O43707 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.01■□□□□ 0.63
ACTN4O43707 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ACTN4O43707 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.01■□□□□ 0.63
ACTN4O43707 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.01■□□□□ 0.63
ACTN4O43707 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms