Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.05■□□□□ 0.48
HOXA2O43364 TSPY16P-201ENST00000449843 468 ntBASIC18.05■□□□□ 0.48
HOXA2O43364 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HOXA2O43364 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.05■□□□□ 0.48
HOXA2O43364 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.05■□□□□ 0.48
HOXA2O43364 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.05■□□□□ 0.48
HOXA2O43364 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.05■□□□□ 0.48
HOXA2O43364 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.05■□□□□ 0.48
HOXA2O43364 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HOXA2O43364 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.05■□□□□ 0.48
HOXA2O43364 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.05■□□□□ 0.48
HOXA2O43364 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXA2O43364 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXA2O43364 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.05■□□□□ 0.48
HOXA2O43364 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HOXA2O43364 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HOXA2O43364 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HOXA2O43364 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.05■□□□□ 0.48
HOXA2O43364 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HOXA2O43364 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HOXA2O43364 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 TUBB8P12-201ENST00000308911 1335 ntBASIC18.04■□□□□ 0.48
HOXA2O43364 TUBB7P-202ENST00000428444 1305 ntBASIC18.04■□□□□ 0.48
HOXA2O43364 TUBB8P7-204ENST00000567960 1332 ntBASIC18.04■□□□□ 0.48
HOXA2O43364 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HOXA2O43364 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.04■□□□□ 0.48
HOXA2O43364 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HOXA2O43364 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HOXA2O43364 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXA2O43364 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.04■□□□□ 0.48
HOXA2O43364 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXA2O43364 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.04■□□□□ 0.48
HOXA2O43364 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXA2O43364 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.04■□□□□ 0.48
HOXA2O43364 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.04■□□□□ 0.48
HOXA2O43364 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HOXA2O43364 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXA2O43364 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXA2O43364 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXA2O43364 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXA2O43364 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXA2O43364 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HOXA2O43364 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.03■□□□□ 0.48
HOXA2O43364 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXA2O43364 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HOXA2O43364 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXA2O43364 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXA2O43364 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXA2O43364 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXA2O43364 LINC00895-201ENST00000629028 1637 ntBASIC18.03■□□□□ 0.48
HOXA2O43364 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXA2O43364 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXA2O43364 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.03■□□□□ 0.48
HOXA2O43364 AC002472.2-201ENST00000442739 958 ntBASIC18.03■□□□□ 0.48
HOXA2O43364 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.03■□□□□ 0.48
HOXA2O43364 AC097493.3-201ENST00000509725 367 ntBASIC18.03■□□□□ 0.48
HOXA2O43364 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.03■□□□□ 0.48
HOXA2O43364 AC124947.2-201ENST00000547118 1133 ntBASIC18.03■□□□□ 0.48
HOXA2O43364 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.03■□□□□ 0.48
HOXA2O43364 AC073389.1-201ENST00000595595 795 ntBASIC18.03■□□□□ 0.48
HOXA2O43364 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HOXA2O43364 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.03■□□□□ 0.48
HOXA2O43364 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXA2O43364 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HOXA2O43364 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXA2O43364 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXA2O43364 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXA2O43364 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXA2O43364 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXA2O43364 GNAS-203ENST00000306120 1878 ntBASIC18.03■□□□□ 0.48
HOXA2O43364 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXA2O43364 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.03■□□□□ 0.48
HOXA2O43364 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
HOXA2O43364 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXA2O43364 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms