Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ABCC4O15439 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ABCC4O15439 SLC22A20-204ENST00000530038 1673 ntBASIC21.48■■□□□ 1.03
ABCC4O15439 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ABCC4O15439 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
ABCC4O15439 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ABCC4O15439 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ABCC4O15439 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.48■■□□□ 1.03
ABCC4O15439 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ABCC4O15439 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ABCC4O15439 TSEN15P1-201ENST00000423257 515 ntBASIC21.48■■□□□ 1.03
ABCC4O15439 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.48■■□□□ 1.03
ABCC4O15439 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.48■■□□□ 1.03
ABCC4O15439 ACTG1P14-201ENST00000446382 1122 ntBASIC21.48■■□□□ 1.03
ABCC4O15439 CXCL1P1-201ENST00000502804 216 ntBASIC21.48■■□□□ 1.03
ABCC4O15439 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.48■■□□□ 1.03
ABCC4O15439 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21.48■■□□□ 1.03
ABCC4O15439 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.48■■□□□ 1.03
ABCC4O15439 MIR3197-201ENST00000582241 73 ntBASIC21.48■■□□□ 1.03
ABCC4O15439 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ABCC4O15439 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.48■■□□□ 1.03
ABCC4O15439 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.48■■□□□ 1.03
ABCC4O15439 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.48■■□□□ 1.03
ABCC4O15439 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.48■■□□□ 1.03
ABCC4O15439 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.48■■□□□ 1.03
ABCC4O15439 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ABCC4O15439 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.48■■□□□ 1.03
ABCC4O15439 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ABCC4O15439 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ABCC4O15439 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ABCC4O15439 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
ABCC4O15439 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.47■■□□□ 1.03
ABCC4O15439 AC011676.5-201ENST00000624864 2660 ntBASIC21.47■■□□□ 1.03
ABCC4O15439 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
ABCC4O15439 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ABCC4O15439 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.47■■□□□ 1.03
ABCC4O15439 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
ABCC4O15439 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ABCC4O15439 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
ABCC4O15439 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ABCC4O15439 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.47■■□□□ 1.03
ABCC4O15439 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 MIR4492-201ENST00000581627 80 ntBASIC21.47■■□□□ 1.03
ABCC4O15439 AC013467.2-201ENST00000605472 835 ntBASIC21.47■■□□□ 1.03
ABCC4O15439 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.47■■□□□ 1.03
ABCC4O15439 ACTL9-202ENST00000612068 1252 ntBASIC21.47■■□□□ 1.03
ABCC4O15439 AL513210.1-201ENST00000629608 234 ntBASIC21.47■■□□□ 1.03
ABCC4O15439 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
ABCC4O15439 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
ABCC4O15439 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ABCC4O15439 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ABCC4O15439 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ABCC4O15439 FLJ38576-201ENST00000623820 2459 ntBASIC21.46■■□□□ 1.03
ABCC4O15439 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ABCC4O15439 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.46■■□□□ 1.03
ABCC4O15439 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ABCC4O15439 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ABCC4O15439 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.46■■□□□ 1.03
ABCC4O15439 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.46■■□□□ 1.03
ABCC4O15439 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
ABCC4O15439 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
ABCC4O15439 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ABCC4O15439 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
ABCC4O15439 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ABCC4O15439 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ABCC4O15439 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.46■■□□□ 1.03
ABCC4O15439 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ABCC4O15439 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.46■■□□□ 1.03
ABCC4O15439 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.46■■□□□ 1.03
ABCC4O15439 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ABCC4O15439 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
ABCC4O15439 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ABCC4O15439 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.46■■□□□ 1.03
ABCC4O15439 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ABCC4O15439 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.46■■□□□ 1.03
ABCC4O15439 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.46■■□□□ 1.03
ABCC4O15439 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ABCC4O15439 AC068137.2-201ENST00000605408 478 ntBASIC21.46■■□□□ 1.03
ABCC4O15439 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.46■■□□□ 1.03
ABCC4O15439 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.46■■□□□ 1.03
ABCC4O15439 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
ABCC4O15439 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ABCC4O15439 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ABCC4O15439 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
ABCC4O15439 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms