Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NDUFA1O15239 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
NDUFA1O15239 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
NDUFA1O15239 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC11.66□□□□□ -0.54
NDUFA1O15239 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
NDUFA1O15239 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
NDUFA1O15239 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.66□□□□□ -0.54
NDUFA1O15239 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC11.66□□□□□ -0.54
NDUFA1O15239 STARP1-201ENST00000397973 869 ntBASIC11.66□□□□□ -0.54
NDUFA1O15239 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC11.66□□□□□ -0.54
NDUFA1O15239 AC087499.1-201ENST00000418141 1075 ntBASIC11.66□□□□□ -0.54
NDUFA1O15239 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC11.66□□□□□ -0.54
NDUFA1O15239 AP003733.1-201ENST00000491725 852 ntBASIC11.66□□□□□ -0.54
NDUFA1O15239 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 AC093827.2-201ENST00000512654 315 ntBASIC11.66□□□□□ -0.54
NDUFA1O15239 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 AP002490.2-201ENST00000524791 560 ntBASIC11.66□□□□□ -0.54
NDUFA1O15239 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC11.66□□□□□ -0.54
NDUFA1O15239 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC11.66□□□□□ -0.54
NDUFA1O15239 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
NDUFA1O15239 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 MTHFR-217ENST00000641820 1569 ntBASIC11.66□□□□□ -0.54
NDUFA1O15239 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.66□□□□□ -0.54
NDUFA1O15239 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NDUFA1O15239 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
NDUFA1O15239 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NDUFA1O15239 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
NDUFA1O15239 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.65□□□□□ -0.54
NDUFA1O15239 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
NDUFA1O15239 PAUPAR-201ENST00000630360 2965 ntBASIC11.65□□□□□ -0.54
NDUFA1O15239 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NDUFA1O15239 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NDUFA1O15239 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
NDUFA1O15239 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NDUFA1O15239 AC104640.1-201ENST00000562617 2109 ntBASIC11.65□□□□□ -0.54
NDUFA1O15239 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NDUFA1O15239 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NDUFA1O15239 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
NDUFA1O15239 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NDUFA1O15239 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NDUFA1O15239 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms