Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 AC008556.1-201ENST00000610908 2040 ntBASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 RBM17P2-201ENST00000616397 1405 ntBASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 GOLGA6L5P-202ENST00000515341 1828 ntBASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 AL355001.2-201ENST00000620617 1191 ntBASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 KATNBL1P6-202ENST00000562413 1466 ntBASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 AL355312.1-201ENST00000407115 2176 ntBASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 UCKL1-AS1-201ENST00000623569 3602 ntBASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 TSPY21P-201ENST00000433481 731 ntBASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 CASP6-205ENST00000505486 538 ntTSL 4 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 AC023632.3-201ENST00000521633 145 ntBASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 CCDC92B-201ENST00000575506 885 ntBASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 SF1-220ENST00000626028 704 ntTSL 2 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms