Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 AP000842.3-202ENST00000569238 1080 ntBASIC24.86■■□□□ 1.57
HFM1A2PYH4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
HFM1A2PYH4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
HFM1A2PYH4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HFM1A2PYH4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
HFM1A2PYH4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HFM1A2PYH4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
HFM1A2PYH4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
HFM1A2PYH4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HFM1A2PYH4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HFM1A2PYH4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 KRT18P32-201ENST00000424695 1287 ntBASIC24.86■■□□□ 1.57
HFM1A2PYH4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC24.86■■□□□ 1.57
HFM1A2PYH4 KRT8P23-201ENST00000560090 1207 ntBASIC24.86■■□□□ 1.57
HFM1A2PYH4 AL031731.1-201ENST00000642131 2094 ntBASIC24.86■■□□□ 1.57
HFM1A2PYH4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HFM1A2PYH4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HFM1A2PYH4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HFM1A2PYH4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HFM1A2PYH4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
HFM1A2PYH4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HFM1A2PYH4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HFM1A2PYH4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HFM1A2PYH4 AL592309.1-201ENST00000443127 649 ntBASIC24.85■■□□□ 1.57
HFM1A2PYH4 HLA-J-203ENST00000494367 1087 ntBASIC24.85■■□□□ 1.57
HFM1A2PYH4 AC109322.1-201ENST00000524499 1264 ntBASIC24.85■■□□□ 1.57
HFM1A2PYH4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC24.85■■□□□ 1.57
HFM1A2PYH4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC24.84■■□□□ 1.57
HFM1A2PYH4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC24.84■■□□□ 1.57
HFM1A2PYH4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
HFM1A2PYH4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC24.84■■□□□ 1.57
HFM1A2PYH4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
HFM1A2PYH4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC24.84■■□□□ 1.57
HFM1A2PYH4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC24.84■■□□□ 1.57
HFM1A2PYH4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC24.84■■□□□ 1.57
HFM1A2PYH4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
HFM1A2PYH4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HFM1A2PYH4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC24.84■■□□□ 1.57
HFM1A2PYH4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC24.83■■□□□ 1.57
HFM1A2PYH4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC24.83■■□□□ 1.57
HFM1A2PYH4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC24.83■■□□□ 1.57
HFM1A2PYH4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HFM1A2PYH4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
HFM1A2PYH4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC24.83■■□□□ 1.57
HFM1A2PYH4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HFM1A2PYH4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HFM1A2PYH4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HFM1A2PYH4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HFM1A2PYH4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC24.83■■□□□ 1.57
HFM1A2PYH4 MIR346-201ENST00000362234 95 ntBASIC24.83■■□□□ 1.57
HFM1A2PYH4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC24.83■■□□□ 1.57
HFM1A2PYH4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC24.83■■□□□ 1.57
HFM1A2PYH4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC24.83■■□□□ 1.57
HFM1A2PYH4 AC015911.4-201ENST00000588022 1070 ntBASIC24.83■■□□□ 1.57
HFM1A2PYH4 AC093028.1-201ENST00000622998 982 ntBASIC24.83■■□□□ 1.57
HFM1A2PYH4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC24.83■■□□□ 1.57
HFM1A2PYH4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
HFM1A2PYH4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HFM1A2PYH4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HFM1A2PYH4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms