Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 AP002490.2-201ENST00000524791 560 ntBASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-7A0A0A0MS04 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC092364.2-201ENST00000596710 2692 ntBASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-7A0A0A0MS04 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms