Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 DBET-201ENST00000630918 3363 ntBASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 AC104640.1-201ENST00000562617 2109 ntBASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 TSSC2-201ENST00000450217 709 ntBASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 AL353692.3-201ENST00000407031 1396 ntBASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 AL365203.3-201ENST00000609742 2057 ntBASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP4B1Q9Y6B7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 AC092053.1-201ENST00000605787 1936 ntBASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 AC092364.2-201ENST00000596710 2692 ntBASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 AC090616.6-201ENST00000582640 721 ntBASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 AC016734.2-201ENST00000624325 1377 ntBASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP4B1Q9Y6B7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms