Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX9Q9Y5X1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX9Q9Y5X1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX9Q9Y5X1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX9Q9Y5X1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX9Q9Y5X1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX9Q9Y5X1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 YBX2P1-201ENST00000394192 760 ntBASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 AC004832.2-201ENST00000426397 482 ntBASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 TOP3BP1-201ENST00000420768 1380 ntBASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 AL021920.2-201ENST00000624828 1351 ntBASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX9Q9Y5X1 AP001094.4-201ENST00000579008 2176 ntBASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 KRT18P13-201ENST00000400056 1290 ntBASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 AC060834.1-201ENST00000443027 2032 ntBASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX9Q9Y5X1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNX9Q9Y5X1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNX9Q9Y5X1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.14■□□□□ 0.49
SNX9Q9Y5X1 PDPK2P-202ENST00000562415 1191 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms