Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 AC012640.2-201ENST00000561606 901 ntBASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 AL356488.2-201ENST00000602755 427 ntBASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 AC092068.3-201ENST00000587894 2016 ntBASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 PI4KAP1-204ENST00000612579 1703 ntBASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB13Q9Y5F0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 AC009078.2-202ENST00000463353 338 ntBASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 RPS15P9-201ENST00000494093 319 ntBASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 AC093909.1-201ENST00000504731 1122 ntBASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 SLC25A6P4-201ENST00000586535 553 ntBASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 GGTLC5P-201ENST00000617623 998 ntBASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHB13Q9Y5F0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 AP002414.3-201ENST00000589352 1468 ntBASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 AC022494.1-201ENST00000466044 728 ntBASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 AP001005.1-201ENST00000571755 1248 ntBASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 AL365223.1-201ENST00000574864 1297 ntBASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 AC005593.1-201ENST00000624894 515 ntBASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB13Q9Y5F0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 RNA5SP419-201ENST00000515908 135 ntBASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms