Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
USP25Q9UHP3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP25Q9UHP3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.53■□□□□ 0.72
USP25Q9UHP3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
USP25Q9UHP3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 AC009336.1-201ENST00000608941 1553 ntBASIC19.53■□□□□ 0.72
USP25Q9UHP3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
USP25Q9UHP3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.53■□□□□ 0.72
USP25Q9UHP3 AC003669.1-201ENST00000334569 611 ntBASIC19.53■□□□□ 0.72
USP25Q9UHP3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.53■□□□□ 0.72
USP25Q9UHP3 DRAXINP1-201ENST00000437611 948 ntBASIC19.53■□□□□ 0.72
USP25Q9UHP3 AC091607.1-201ENST00000490318 1060 ntBASIC19.53■□□□□ 0.72
USP25Q9UHP3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.53■□□□□ 0.72
USP25Q9UHP3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.53■□□□□ 0.72
USP25Q9UHP3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.53■□□□□ 0.72
USP25Q9UHP3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP25Q9UHP3 AC105917.1-201ENST00000506637 2539 ntBASIC19.53■□□□□ 0.72
USP25Q9UHP3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP25Q9UHP3 MST1L-201ENST00000442552 2185 ntBASIC19.52■□□□□ 0.72
USP25Q9UHP3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP25Q9UHP3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP25Q9UHP3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.52■□□□□ 0.72
USP25Q9UHP3 TSSC2-201ENST00000450217 709 ntBASIC19.52■□□□□ 0.72
USP25Q9UHP3 STK19B-204ENST00000512515 211 ntBASIC19.52■□□□□ 0.72
USP25Q9UHP3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.52■□□□□ 0.72
USP25Q9UHP3 AP005901.3-202ENST00000581653 237 ntBASIC19.52■□□□□ 0.72
USP25Q9UHP3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.52■□□□□ 0.72
USP25Q9UHP3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP25Q9UHP3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP25Q9UHP3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP25Q9UHP3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP25Q9UHP3 AC233702.3-201ENST00000578656 1387 ntBASIC19.52■□□□□ 0.72
USP25Q9UHP3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP25Q9UHP3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP25Q9UHP3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP25Q9UHP3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.71
USP25Q9UHP3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP25Q9UHP3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
USP25Q9UHP3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP25Q9UHP3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP25Q9UHP3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 KRT18P21-201ENST00000515767 1272 ntBASIC19.51■□□□□ 0.71
USP25Q9UHP3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 Z69720.1-201ENST00000601483 472 ntBASIC19.51■□□□□ 0.71
USP25Q9UHP3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 EGFEM1P-202ENST00000431685 1563 ntBASIC19.51■□□□□ 0.71
USP25Q9UHP3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.51■□□□□ 0.71
USP25Q9UHP3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP25Q9UHP3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms