Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS11Q9H270 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS11Q9H270 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VPS11Q9H270 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS11Q9H270 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS11Q9H270 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VPS11Q9H270 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS11Q9H270 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
VPS11Q9H270 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS11Q9H270 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS11Q9H270 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
VPS11Q9H270 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.14■□□□□ 0.34
VPS11Q9H270 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.14■□□□□ 0.34
VPS11Q9H270 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS11Q9H270 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
VPS11Q9H270 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
VPS11Q9H270 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VPS11Q9H270 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VPS11Q9H270 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS11Q9H270 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS11Q9H270 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.14■□□□□ 0.33
VPS11Q9H270 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.14■□□□□ 0.33
VPS11Q9H270 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.14■□□□□ 0.33
VPS11Q9H270 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
VPS11Q9H270 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
VPS11Q9H270 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS11Q9H270 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
VPS11Q9H270 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS11Q9H270 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VPS11Q9H270 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS11Q9H270 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS11Q9H270 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 AL353593.2-201ENST00000602529 1483 ntBASIC17.13■□□□□ 0.33
VPS11Q9H270 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VPS11Q9H270 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS11Q9H270 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS11Q9H270 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.13■□□□□ 0.33
VPS11Q9H270 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS11Q9H270 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.13■□□□□ 0.33
VPS11Q9H270 LINC01238-205ENST00000567549 1107 ntBASIC17.13■□□□□ 0.33
VPS11Q9H270 AC009336.1-201ENST00000608941 1553 ntBASIC17.13■□□□□ 0.33
VPS11Q9H270 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS11Q9H270 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS11Q9H270 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS11Q9H270 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VPS11Q9H270 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS11Q9H270 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VPS11Q9H270 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.12■□□□□ 0.33
VPS11Q9H270 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS11Q9H270 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS11Q9H270 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.12■□□□□ 0.33
VPS11Q9H270 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS11Q9H270 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS11Q9H270 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS11Q9H270 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS11Q9H270 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.12■□□□□ 0.33
VPS11Q9H270 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS11Q9H270 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS11Q9H270 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
VPS11Q9H270 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
VPS11Q9H270 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.12■□□□□ 0.33
VPS11Q9H270 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VPS11Q9H270 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VPS11Q9H270 KRT8P26-201ENST00000534154 1276 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms