Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 DNAJB3-201ENST00000446806 729 ntBASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 AC124067.4-201ENST00000519691 2379 ntBASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 AC002310.6-201ENST00000624451 1377 ntBASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP3Q9BWW4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 MIR1233-2-201ENST00000408138 82 ntBASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 MIR1233-1-201ENST00000408722 82 ntBASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 AC023274.1-201ENST00000418278 595 ntBASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 PAWRP1-201ENST00000451083 565 ntBASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 GPALPP1-207ENST00000611650 899 ntBASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.19□□□□□ -0.14
SSBP3Q9BWW4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms