Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 KRT43P-201ENST00000434019 910 ntBASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 CTBP2P5-201ENST00000454986 1264 ntBASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC22.27■■□□□ 1.16
COL22A1Q8NFW1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.27■■□□□ 1.15
COL22A1Q8NFW1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 AC138028.4-201ENST00000564984 1845 ntBASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 AL021920.2-201ENST00000624828 1351 ntBASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.26■■□□□ 1.15
COL22A1Q8NFW1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 CLK3P2-201ENST00000427566 1453 ntBASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 SDHAP3-202ENST00000515467 728 ntBASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL22A1Q8NFW1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 FRMD8P1-201ENST00000440433 1524 ntBASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 PARP8-206ENST00000503665 572 ntTSL 4 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 AC093525.8-201ENST00000624099 1342 ntBASIC22.24■■□□□ 1.15
COL22A1Q8NFW1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 GOLGA2P4-201ENST00000441462 777 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms