Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.19■□□□□ 0.02
NANOGP1Q8N7R0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.19■□□□□ 0.02
NANOGP1Q8N7R0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NANOGP1Q8N7R0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NANOGP1Q8N7R0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 TSPY26P-202ENST00000565928 3884 ntBASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 LINC00895-201ENST00000629028 1637 ntBASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 MIR662-201ENST00000384847 95 ntBASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NANOGP1Q8N7R0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 AL138966.2-201ENST00000621997 464 ntBASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 AL023973.1-201ENST00000624619 620 ntBASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 AC068418.2-201ENST00000577309 3703 ntBASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NANOGP1Q8N7R0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms