Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
DEPDC4Q8N2C3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DEPDC4Q8N2C3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
DEPDC4Q8N2C3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DEPDC4Q8N2C3 PCDHB17P-201ENST00000539533 2393 ntBASIC15.9■□□□□ 0.14
DEPDC4Q8N2C3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 KC6-207ENST00000600644 2311 ntTSL 3 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 AC092068.3-201ENST00000587894 2016 ntBASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 AC063926.3-201ENST00000624734 5658 ntBASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 AC092053.1-201ENST00000605787 1936 ntBASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 KRT89P-201ENST00000620027 1478 ntBASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DEPDC4Q8N2C3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 RNF216P1-203ENST00000404404 2427 ntBASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 SLC25A1P3-201ENST00000395415 828 ntBASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 AC002558.1-201ENST00000488906 803 ntBASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DEPDC4Q8N2C3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.87■□□□□ 0.13
DEPDC4Q8N2C3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms