Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 AL845331.1-201ENST00000424978 1190 ntBASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 AC117947.1-201ENST00000427448 529 ntBASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 BX664615.1-201ENST00000443558 458 ntBASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 DUX4L17-201ENST00000557360 1267 ntBASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 AC132938.5-201ENST00000624980 1813 ntBASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 ME2P1-201ENST00000426028 1970 ntBASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 AC087499.1-201ENST00000418141 1075 ntBASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 SPDYE13P-201ENST00000445314 798 ntBASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 AC112907.2-201ENST00000448639 330 ntBASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 GUSBP12-201ENST00000513727 720 ntBASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 AC024909.3-201ENST00000611513 2257 ntBASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 TMEM191A-211ENST00000637163 1067 ntBASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM1Q86UE6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM1Q86UE6 AC003669.1-201ENST00000334569 611 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms