Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM5Q71RC9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SMIM5Q71RC9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM5Q71RC9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.22■□□□□ 0.99
SMIM5Q71RC9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.22■□□□□ 0.99
SMIM5Q71RC9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM5Q71RC9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM5Q71RC9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
SMIM5Q71RC9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 RN7SL752P-201ENST00000463779 287 ntBASIC21.21■□□□□ 0.99
SMIM5Q71RC9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 AC017083.2-201ENST00000608069 979 ntBASIC21.21■□□□□ 0.99
SMIM5Q71RC9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM5Q71RC9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 AL512384.1-201ENST00000406683 331 ntBASIC21.2■□□□□ 0.98
SMIM5Q71RC9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 AL133215.2-201ENST00000609242 977 ntBASIC21.2■□□□□ 0.98
SMIM5Q71RC9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM5Q71RC9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 EGFEM1P-202ENST00000431685 1563 ntBASIC21.19■□□□□ 0.98
SMIM5Q71RC9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 SPDYE19P-201ENST00000338590 713 ntBASIC21.19■□□□□ 0.98
SMIM5Q71RC9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 Six3os1_5.1-201ENST00000611000 271 ntBASIC21.19■□□□□ 0.98
SMIM5Q71RC9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM5Q71RC9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC21.18■□□□□ 0.98
SMIM5Q71RC9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms