Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2B3Q16720 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2B3Q16720 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2B3Q16720 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.77■□□□□ 0.92
ATP2B3Q16720 AL353732.1-201ENST00000569618 1459 ntBASIC20.77■□□□□ 0.92
ATP2B3Q16720 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.77■□□□□ 0.92
ATP2B3Q16720 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.77■□□□□ 0.92
ATP2B3Q16720 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.77■□□□□ 0.92
ATP2B3Q16720 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP2B3Q16720 AL596442.2-201ENST00000610240 980 ntBASIC20.77■□□□□ 0.92
ATP2B3Q16720 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2B3Q16720 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2B3Q16720 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ATP2B3Q16720 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2B3Q16720 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2B3Q16720 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2B3Q16720 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP2B3Q16720 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP2B3Q16720 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP2B3Q16720 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP2B3Q16720 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
ATP2B3Q16720 AC092053.1-201ENST00000605787 1936 ntBASIC20.76■□□□□ 0.91
ATP2B3Q16720 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 HMGA1P7-201ENST00000406908 502 ntBASIC20.76■□□□□ 0.91
ATP2B3Q16720 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 SLC22A20-204ENST00000530038 1673 ntBASIC20.76■□□□□ 0.91
ATP2B3Q16720 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
ATP2B3Q16720 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP2B3Q16720 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B3Q16720 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B3Q16720 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B3Q16720 AC012569.1-201ENST00000591191 1524 ntBASIC20.75■□□□□ 0.91
ATP2B3Q16720 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B3Q16720 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B3Q16720 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B3Q16720 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B3Q16720 AC140658.5-201ENST00000438532 169 ntBASIC20.75■□□□□ 0.91
ATP2B3Q16720 ACTG1P14-201ENST00000446382 1122 ntBASIC20.75■□□□□ 0.91
ATP2B3Q16720 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B3Q16720 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 AC112191.1-201ENST00000523689 701 ntBASIC20.75■□□□□ 0.91
ATP2B3Q16720 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 AC091167.2-201ENST00000579581 588 ntBASIC20.75■□□□□ 0.91
ATP2B3Q16720 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B3Q16720 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B3Q16720 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP2B3Q16720 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP2B3Q16720 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ATP2B3Q16720 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2B3Q16720 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP2B3Q16720 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2B3Q16720 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2B3Q16720 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms