Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.89■□□□□ 0.93
DDR1Q08345 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDR1Q08345 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
DDR1Q08345 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDR1Q08345 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.89■□□□□ 0.93
DDR1Q08345 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDR1Q08345 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDR1Q08345 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDR1Q08345 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDR1Q08345 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.88■□□□□ 0.93
DDR1Q08345 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDR1Q08345 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
DDR1Q08345 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
DDR1Q08345 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.88■□□□□ 0.93
DDR1Q08345 FAM220BP-201ENST00000377689 816 ntBASIC20.88■□□□□ 0.93
DDR1Q08345 AC112492.5-201ENST00000421897 457 ntBASIC20.88■□□□□ 0.93
DDR1Q08345 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.88■□□□□ 0.93
DDR1Q08345 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.88■□□□□ 0.93
DDR1Q08345 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDR1Q08345 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.88■□□□□ 0.93
DDR1Q08345 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.88■□□□□ 0.93
DDR1Q08345 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
DDR1Q08345 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDR1Q08345 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDR1Q08345 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.88■□□□□ 0.93
DDR1Q08345 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDR1Q08345 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.88■□□□□ 0.93
DDR1Q08345 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
DDR1Q08345 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDR1Q08345 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDR1Q08345 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDR1Q08345 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
DDR1Q08345 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.87■□□□□ 0.93
DDR1Q08345 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.87■□□□□ 0.93
DDR1Q08345 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDR1Q08345 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDR1Q08345 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDR1Q08345 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDR1Q08345 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.87■□□□□ 0.93
DDR1Q08345 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDR1Q08345 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
DDR1Q08345 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.87■□□□□ 0.93
DDR1Q08345 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.87■□□□□ 0.93
DDR1Q08345 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDR1Q08345 AC105021.1-202ENST00000570572 669 ntBASIC20.87■□□□□ 0.93
DDR1Q08345 AC008494.3-201ENST00000606615 944 ntBASIC20.87■□□□□ 0.93
DDR1Q08345 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.87■□□□□ 0.93
DDR1Q08345 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDR1Q08345 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.87■□□□□ 0.93
DDR1Q08345 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.87■□□□□ 0.93
DDR1Q08345 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDR1Q08345 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDR1Q08345 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
DDR1Q08345 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.87■□□□□ 0.93
DDR1Q08345 KRT8P49-201ENST00000604166 1432 ntBASIC20.87■□□□□ 0.93
DDR1Q08345 AC133963.1-201ENST00000504166 1679 ntBASIC20.86■□□□□ 0.93
DDR1Q08345 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
DDR1Q08345 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.86■□□□□ 0.93
DDR1Q08345 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.86■□□□□ 0.93
DDR1Q08345 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 AP006294.1-201ENST00000415407 339 ntBASIC20.86■□□□□ 0.93
DDR1Q08345 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.86■□□□□ 0.93
DDR1Q08345 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 RN7SL752P-201ENST00000463779 287 ntBASIC20.86■□□□□ 0.93
DDR1Q08345 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.86■□□□□ 0.93
DDR1Q08345 SPDYE18-201ENST00000510091 1050 ntBASIC20.86■□□□□ 0.93
DDR1Q08345 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.86■□□□□ 0.93
DDR1Q08345 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.86■□□□□ 0.93
DDR1Q08345 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
DDR1Q08345 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
DDR1Q08345 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
DDR1Q08345 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDR1Q08345 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.85■□□□□ 0.93
DDR1Q08345 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.85■□□□□ 0.93
DDR1Q08345 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDR1Q08345 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDR1Q08345 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.85■□□□□ 0.93
DDR1Q08345 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDR1Q08345 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDR1Q08345 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.85■□□□□ 0.93
DDR1Q08345 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.85■□□□□ 0.93
DDR1Q08345 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.85■□□□□ 0.93
DDR1Q08345 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DDR1Q08345 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
DDR1Q08345 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.85■□□□□ 0.93
DDR1Q08345 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.85■□□□□ 0.93
DDR1Q08345 ZNF890P-202ENST00000530367 1156 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms