Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 AC096631.2-201ENST00000436136 790 ntBASIC13.32□□□□□ -0.28
RAB5BP61020 AL603832.2-201ENST00000566195 2125 ntBASIC13.32□□□□□ -0.28
RAB5BP61020 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.32□□□□□ -0.28
RAB5BP61020 AC016405.3-201ENST00000607710 860 ntBASIC13.32□□□□□ -0.28
RAB5BP61020 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB5BP61020 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB5BP61020 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB5BP61020 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB5BP61020 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 AP006587.1-201ENST00000534129 1502 ntBASIC13.32□□□□□ -0.28
RAB5BP61020 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB5BP61020 AC010327.5-201ENST00000586923 3061 ntBASIC13.32□□□□□ -0.28
RAB5BP61020 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 HTR7P1-201ENST00000538670 1336 ntBASIC13.32□□□□□ -0.28
RAB5BP61020 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB5BP61020 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB5BP61020 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB5BP61020 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5BP61020 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB5BP61020 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB5BP61020 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5BP61020 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB5BP61020 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB5BP61020 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RAB5BP61020 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 TERF1P2-201ENST00000583350 1212 ntBASIC13.31□□□□□ -0.28
RAB5BP61020 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
RAB5BP61020 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB5BP61020 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 LINC01101-201ENST00000622953 1884 ntBASIC13.31□□□□□ -0.28
RAB5BP61020 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
RAB5BP61020 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB5BP61020 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB5BP61020 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 AC009090.5-201ENST00000624886 2285 ntBASIC13.3□□□□□ -0.28
RAB5BP61020 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB5BP61020 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RAB5BP61020 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB5BP61020 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB5BP61020 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RAB5BP61020 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB5BP61020 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB5BP61020 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RAB5BP61020 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 AC131212.1-201ENST00000613771 668 ntBASIC13.3□□□□□ -0.28
RAB5BP61020 AC041040.2-201ENST00000622926 2899 ntBASIC13.3□□□□□ -0.28
RAB5BP61020 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 AP005117.1-202ENST00000581724 1908 ntBASIC13.3□□□□□ -0.28
RAB5BP61020 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
RAB5BP61020 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RAB5BP61020 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms