Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 HTR5BP-201ENST00000430851 1154 ntBASIC19.47■□□□□ 0.71
CHMP4BP1P59074 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 HMGN1P19-201ENST00000436976 333 ntBASIC19.47■□□□□ 0.71
CHMP4BP1P59074 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP4BP1P59074 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 PTCHD3P3-201ENST00000403073 906 ntBASIC19.46■□□□□ 0.71
CHMP4BP1P59074 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 AC008667.4-201ENST00000607370 168 ntBASIC19.46■□□□□ 0.71
CHMP4BP1P59074 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 GPR89P-201ENST00000407924 1495 ntBASIC19.46■□□□□ 0.71
CHMP4BP1P59074 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 KRT18P28-201ENST00000453838 1332 ntBASIC19.46■□□□□ 0.71
CHMP4BP1P59074 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP4BP1P59074 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 AC002310.6-201ENST00000624451 1377 ntBASIC19.45■□□□□ 0.7
CHMP4BP1P59074 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 MCCD1P2-201ENST00000423228 335 ntBASIC19.45■□□□□ 0.7
CHMP4BP1P59074 METTL21AP1-201ENST00000438852 635 ntBASIC19.45■□□□□ 0.7
CHMP4BP1P59074 IGHV3-65-201ENST00000523210 341 ntBASIC19.45■□□□□ 0.7
CHMP4BP1P59074 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 STK25P1-201ENST00000585406 838 ntBASIC19.45■□□□□ 0.7
CHMP4BP1P59074 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 AL118508.1-201ENST00000613502 2345 ntBASIC19.45■□□□□ 0.7
CHMP4BP1P59074 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP4BP1P59074 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms