Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNA4P52798 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNA4P52798 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNA4P52798 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
EFNA4P52798 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 AC008764.6-201ENST00000595909 2069 ntBASIC14.2□□□□□ -0.14
EFNA4P52798 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 SPCS2P4-201ENST00000436160 681 ntBASIC14.2□□□□□ -0.14
EFNA4P52798 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNA4P52798 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNA4P52798 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.2□□□□□ -0.14
EFNA4P52798 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 AL031055.1-201ENST00000606362 631 ntBASIC14.2□□□□□ -0.14
EFNA4P52798 AL096865.1-201ENST00000606796 927 ntBASIC14.2□□□□□ -0.14
EFNA4P52798 AP001059.3-201ENST00000619053 235 ntBASIC14.2□□□□□ -0.14
EFNA4P52798 Z92544.3-201ENST00000624747 417 ntBASIC14.2□□□□□ -0.14
EFNA4P52798 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNA4P52798 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNA4P52798 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 AL138688.1-201ENST00000624851 1594 ntBASIC14.2□□□□□ -0.14
EFNA4P52798 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
EFNA4P52798 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA4P52798 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNA4P52798 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNA4P52798 UXT-AS1-201ENST00000590504 1525 ntBASIC14.2□□□□□ -0.14
EFNA4P52798 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EFNA4P52798 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
EFNA4P52798 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
EFNA4P52798 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA4P52798 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA4P52798 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
EFNA4P52798 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EFNA4P52798 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EFNA4P52798 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNA4P52798 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
EFNA4P52798 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA4P52798 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA4P52798 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNA4P52798 RNU1-129P-201ENST00000384064 167 ntBASIC14.19□□□□□ -0.14
EFNA4P52798 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.19□□□□□ -0.14
EFNA4P52798 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.19□□□□□ -0.14
EFNA4P52798 RNA5SP421-201ENST00000516864 134 ntBASIC14.19□□□□□ -0.14
EFNA4P52798 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA4P52798 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
EFNA4P52798 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.19□□□□□ -0.14
EFNA4P52798 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNA4P52798 U1.21-201ENST00000580816 167 ntBASIC14.19□□□□□ -0.14
EFNA4P52798 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.19□□□□□ -0.14
EFNA4P52798 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA4P52798 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA4P52798 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNA4P52798 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA4P52798 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA4P52798 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
EFNA4P52798 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
EFNA4P52798 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
EFNA4P52798 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA4P52798 FZD10-202ENST00000539839 3282 ntBASIC14.19□□□□□ -0.14
EFNA4P52798 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNA4P52798 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA4P52798 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
EFNA4P52798 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EFNA4P52798 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA4P52798 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
EFNA4P52798 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA4P52798 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.18□□□□□ -0.14
EFNA4P52798 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EFNA4P52798 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA4P52798 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA4P52798 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA4P52798 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA4P52798 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA4P52798 SLC22A20-204ENST00000530038 1673 ntBASIC14.18□□□□□ -0.14
EFNA4P52798 FAM58DP-201ENST00000428076 619 ntBASIC14.18□□□□□ -0.14
EFNA4P52798 RBPMS2P1-201ENST00000437762 623 ntBASIC14.18□□□□□ -0.14
EFNA4P52798 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.18□□□□□ -0.14
EFNA4P52798 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNA4P52798 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNA4P52798 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.18□□□□□ -0.14
EFNA4P52798 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.18□□□□□ -0.14
EFNA4P52798 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.18□□□□□ -0.14
EFNA4P52798 MPDU1-223ENST00000582151 728 ntBASIC14.18□□□□□ -0.14
EFNA4P52798 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNA4P52798 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
EFNA4P52798 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA4P52798 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
EFNA4P52798 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNA4P52798 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms