Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDE6CP51160 KRT18P58-201ENST00000527480 1120 ntBASIC18.4■□□□□ 0.54
PDE6CP51160 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.4■□□□□ 0.54
PDE6CP51160 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.4■□□□□ 0.54
PDE6CP51160 AC025062.2-201ENST00000605477 670 ntBASIC18.4■□□□□ 0.54
PDE6CP51160 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.4■□□□□ 0.54
PDE6CP51160 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.4■□□□□ 0.54
PDE6CP51160 AC008735.5-201ENST00000623544 497 ntBASIC18.4■□□□□ 0.54
PDE6CP51160 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.4■□□□□ 0.54
PDE6CP51160 AC107918.4-202ENST00000641623 219 ntBASIC18.4■□□□□ 0.54
PDE6CP51160 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PDE6CP51160 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6CP51160 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6CP51160 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDE6CP51160 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.4■□□□□ 0.54
PDE6CP51160 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6CP51160 AC005915.1-201ENST00000624912 2018 ntBASIC18.4■□□□□ 0.54
PDE6CP51160 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6CP51160 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.4■□□□□ 0.54
PDE6CP51160 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.4■□□□□ 0.54
PDE6CP51160 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDE6CP51160 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.39■□□□□ 0.54
PDE6CP51160 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PDE6CP51160 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDE6CP51160 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 AL118508.1-201ENST00000613502 2345 ntBASIC18.39■□□□□ 0.53
PDE6CP51160 AC097637.2-201ENST00000624096 1997 ntBASIC18.39■□□□□ 0.53
PDE6CP51160 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PDE6CP51160 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 AC106886.4-201ENST00000623557 2502 ntBASIC18.39■□□□□ 0.53
PDE6CP51160 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.39■□□□□ 0.53
PDE6CP51160 AC106730.1-201ENST00000566722 1090 ntBASIC18.39■□□□□ 0.53
PDE6CP51160 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.39■□□□□ 0.53
PDE6CP51160 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.39■□□□□ 0.53
PDE6CP51160 AC116407.3-201ENST00000623905 1129 ntBASIC18.39■□□□□ 0.53
PDE6CP51160 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 AC105020.1-201ENST00000435356 2205 ntBASIC18.39■□□□□ 0.53
PDE6CP51160 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDE6CP51160 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.39■□□□□ 0.53
PDE6CP51160 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.39■□□□□ 0.53
PDE6CP51160 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDE6CP51160 AC092068.3-201ENST00000587894 2016 ntBASIC18.39■□□□□ 0.53
PDE6CP51160 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.38■□□□□ 0.53
PDE6CP51160 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.38■□□□□ 0.53
PDE6CP51160 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.38■□□□□ 0.53
PDE6CP51160 RPL13AP23-201ENST00000480739 586 ntBASIC18.38■□□□□ 0.53
PDE6CP51160 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.38■□□□□ 0.53
PDE6CP51160 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.38■□□□□ 0.53
PDE6CP51160 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.38■□□□□ 0.53
PDE6CP51160 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.38■□□□□ 0.53
PDE6CP51160 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.38■□□□□ 0.53
PDE6CP51160 AL049840.3-201ENST00000602669 611 ntBASIC18.38■□□□□ 0.53
PDE6CP51160 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PDE6CP51160 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PDE6CP51160 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PDE6CP51160 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDE6CP51160 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE6CP51160 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PDE6CP51160 AC004817.3-201ENST00000602957 2129 ntBASIC18.37■□□□□ 0.53
PDE6CP51160 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.37■□□□□ 0.53
PDE6CP51160 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PDE6CP51160 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 AC105339.3-201ENST00000560043 636 ntBASIC18.37■□□□□ 0.53
PDE6CP51160 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE6CP51160 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PDE6CP51160 AC006557.2-201ENST00000592985 1240 ntBASIC18.37■□□□□ 0.53
PDE6CP51160 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE6CP51160 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms