Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
CDC34P49427 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.48□□□□□ -0.25
CDC34P49427 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CDC34P49427 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CDC34P49427 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.48□□□□□ -0.25
CDC34P49427 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.48□□□□□ -0.25
CDC34P49427 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.48□□□□□ -0.25
CDC34P49427 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC34P49427 IGHV3-52-201ENST00000519770 353 ntBASIC13.48□□□□□ -0.25
CDC34P49427 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC34P49427 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.48□□□□□ -0.25
CDC34P49427 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.48□□□□□ -0.25
CDC34P49427 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.48□□□□□ -0.25
CDC34P49427 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC34P49427 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC34P49427 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CDC34P49427 MTHFR-217ENST00000641820 1569 ntBASIC13.48□□□□□ -0.25
CDC34P49427 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CDC34P49427 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC34P49427 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC34P49427 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CDC34P49427 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 AC005052.1-201ENST00000625181 2492 ntBASIC13.48□□□□□ -0.25
CDC34P49427 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC34P49427 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.47□□□□□ -0.25
CDC34P49427 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.47□□□□□ -0.25
CDC34P49427 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CDC34P49427 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.47□□□□□ -0.25
CDC34P49427 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 AL391256.1-201ENST00000443260 1855 ntBASIC13.47□□□□□ -0.25
CDC34P49427 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CDC34P49427 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.47□□□□□ -0.25
CDC34P49427 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.47□□□□□ -0.25
CDC34P49427 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CDC34P49427 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.47□□□□□ -0.25
CDC34P49427 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.47□□□□□ -0.25
CDC34P49427 AP001412.1-201ENST00000608405 714 ntBASIC13.47□□□□□ -0.25
CDC34P49427 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CDC34P49427 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CDC34P49427 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CDC34P49427 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC34P49427 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.47□□□□□ -0.25
CDC34P49427 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC34P49427 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC34P49427 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC34P49427 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC34P49427 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC34P49427 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CDC34P49427 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.46□□□□□ -0.25
CDC34P49427 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC34P49427 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC34P49427 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC34P49427 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC34P49427 AC006538.1-201ENST00000567905 1585 ntBASIC13.46□□□□□ -0.25
CDC34P49427 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.46□□□□□ -0.25
CDC34P49427 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC34P49427 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.46□□□□□ -0.25
CDC34P49427 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms