Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF4P48230 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TM4SF4P48230 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.11■□□□□ 0.65
TM4SF4P48230 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF4P48230 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.11■□□□□ 0.65
TM4SF4P48230 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF4P48230 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.11■□□□□ 0.65
TM4SF4P48230 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TM4SF4P48230 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF4P48230 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.11■□□□□ 0.65
TM4SF4P48230 RN7SL219P-201ENST00000582872 296 ntBASIC19.11■□□□□ 0.65
TM4SF4P48230 AL033527.5-201ENST00000641382 801 ntBASIC19.11■□□□□ 0.65
TM4SF4P48230 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.11■□□□□ 0.65
TM4SF4P48230 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF4P48230 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF4P48230 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.11■□□□□ 0.65
TM4SF4P48230 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF4P48230 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF4P48230 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF4P48230 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF4P48230 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF4P48230 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF4P48230 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF4P48230 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF4P48230 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF4P48230 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF4P48230 AC020907.1-201ENST00000616460 1350 ntBASIC19.1■□□□□ 0.65
TM4SF4P48230 AC138028.4-201ENST00000564984 1845 ntBASIC19.1■□□□□ 0.65
TM4SF4P48230 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TM4SF4P48230 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF4P48230 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
TM4SF4P48230 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF4P48230 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TM4SF4P48230 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF4P48230 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TM4SF4P48230 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TM4SF4P48230 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.1■□□□□ 0.65
TM4SF4P48230 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TM4SF4P48230 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF4P48230 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF4P48230 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.1■□□□□ 0.65
TM4SF4P48230 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TM4SF4P48230 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.1■□□□□ 0.65
TM4SF4P48230 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.1■□□□□ 0.65
TM4SF4P48230 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF4P48230 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF4P48230 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.1■□□□□ 0.65
TM4SF4P48230 BTNL10-201ENST00000595971 695 ntBASIC19.1■□□□□ 0.65
TM4SF4P48230 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF4P48230 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF4P48230 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF4P48230 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.1■□□□□ 0.65
TM4SF4P48230 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TM4SF4P48230 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF4P48230 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.1■□□□□ 0.65
TM4SF4P48230 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.1■□□□□ 0.65
TM4SF4P48230 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TM4SF4P48230 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.09■□□□□ 0.65
TM4SF4P48230 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 AL021920.2-201ENST00000624828 1351 ntBASIC19.09■□□□□ 0.65
TM4SF4P48230 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.09■□□□□ 0.65
TM4SF4P48230 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.09■□□□□ 0.65
TM4SF4P48230 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.09■□□□□ 0.65
TM4SF4P48230 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 SPDYE17-201ENST00000412399 783 ntBASIC19.09■□□□□ 0.65
TM4SF4P48230 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.09■□□□□ 0.65
TM4SF4P48230 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.09■□□□□ 0.65
TM4SF4P48230 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.09■□□□□ 0.65
TM4SF4P48230 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.09■□□□□ 0.65
TM4SF4P48230 RRP7BP-205ENST00000566851 833 ntBASIC19.09■□□□□ 0.65
TM4SF4P48230 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.09■□□□□ 0.65
TM4SF4P48230 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.09■□□□□ 0.65
TM4SF4P48230 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TM4SF4P48230 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
TM4SF4P48230 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TM4SF4P48230 AC073130.3-201ENST00000624389 2278 ntBASIC19.09■□□□□ 0.65
TM4SF4P48230 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.09■□□□□ 0.65
TM4SF4P48230 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.09■□□□□ 0.65
TM4SF4P48230 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TM4SF4P48230 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM4SF4P48230 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TM4SF4P48230 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.08■□□□□ 0.65
TM4SF4P48230 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.08■□□□□ 0.65
TM4SF4P48230 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
TM4SF4P48230 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.08■□□□□ 0.65
TM4SF4P48230 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.08■□□□□ 0.64
TM4SF4P48230 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TM4SF4P48230 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.08■□□□□ 0.64
TM4SF4P48230 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms