Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEDD4P46934 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.96■□□□□ 0.79
NEDD4P46934 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NEDD4P46934 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.96■□□□□ 0.79
NEDD4P46934 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.96■□□□□ 0.79
NEDD4P46934 AC005412.3-201ENST00000580309 715 ntBASIC19.96■□□□□ 0.79
NEDD4P46934 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.96■□□□□ 0.79
NEDD4P46934 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.96■□□□□ 0.79
NEDD4P46934 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NEDD4P46934 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.96■□□□□ 0.79
NEDD4P46934 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NEDD4P46934 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
NEDD4P46934 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.79
NEDD4P46934 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.95■□□□□ 0.78
NEDD4P46934 BCAR1-209ENST00000546196 1340 ntBASIC19.95■□□□□ 0.78
NEDD4P46934 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.95■□□□□ 0.78
NEDD4P46934 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.95■□□□□ 0.78
NEDD4P46934 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEDD4P46934 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.95■□□□□ 0.78
NEDD4P46934 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEDD4P46934 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEDD4P46934 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.95■□□□□ 0.78
NEDD4P46934 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEDD4P46934 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.95■□□□□ 0.78
NEDD4P46934 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NEDD4P46934 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEDD4P46934 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEDD4P46934 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEDD4P46934 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.95■□□□□ 0.78
NEDD4P46934 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEDD4P46934 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NEDD4P46934 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.95■□□□□ 0.78
NEDD4P46934 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEDD4P46934 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.95■□□□□ 0.78
NEDD4P46934 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
NEDD4P46934 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.95■□□□□ 0.78
NEDD4P46934 AC091167.2-201ENST00000579581 588 ntBASIC19.95■□□□□ 0.78
NEDD4P46934 MIR4492-201ENST00000581627 80 ntBASIC19.95■□□□□ 0.78
NEDD4P46934 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.95■□□□□ 0.78
NEDD4P46934 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.95■□□□□ 0.78
NEDD4P46934 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.95■□□□□ 0.78
NEDD4P46934 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.95■□□□□ 0.78
NEDD4P46934 AL353732.1-201ENST00000569618 1459 ntBASIC19.95■□□□□ 0.78
NEDD4P46934 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.95■□□□□ 0.78
NEDD4P46934 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEDD4P46934 AC106886.4-201ENST00000623557 2502 ntBASIC19.95■□□□□ 0.78
NEDD4P46934 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NEDD4P46934 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.95■□□□□ 0.78
NEDD4P46934 PMS2P7-201ENST00000506558 1336 ntBASIC19.95■□□□□ 0.78
NEDD4P46934 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEDD4P46934 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NEDD4P46934 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.94■□□□□ 0.78
NEDD4P46934 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
NEDD4P46934 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.94■□□□□ 0.78
NEDD4P46934 AC025580.3-201ENST00000617932 1424 ntBASIC19.94■□□□□ 0.78
NEDD4P46934 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.94■□□□□ 0.78
NEDD4P46934 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.94■□□□□ 0.78
NEDD4P46934 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.94■□□□□ 0.78
NEDD4P46934 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.94■□□□□ 0.78
NEDD4P46934 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.94■□□□□ 0.78
NEDD4P46934 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.94■□□□□ 0.78
NEDD4P46934 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEDD4P46934 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.94■□□□□ 0.78
NEDD4P46934 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NEDD4P46934 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.93■□□□□ 0.78
NEDD4P46934 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NEDD4P46934 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 HTR7P1-202ENST00000624664 4411 ntBASIC19.93■□□□□ 0.78
NEDD4P46934 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NEDD4P46934 AC131009.4-201ENST00000624048 1740 ntBASIC19.93■□□□□ 0.78
NEDD4P46934 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms