Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.23■□□□□ 0.19
KRT20P35900 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.23■□□□□ 0.19
KRT20P35900 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.23■□□□□ 0.19
KRT20P35900 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
KRT20P35900 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.23■□□□□ 0.19
KRT20P35900 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
KRT20P35900 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT20P35900 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT20P35900 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT20P35900 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT20P35900 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT20P35900 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT20P35900 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT20P35900 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KRT20P35900 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KRT20P35900 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
KRT20P35900 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT20P35900 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KRT20P35900 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT20P35900 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT20P35900 KRT18P31-201ENST00000506277 1292 ntBASIC16.22■□□□□ 0.19
KRT20P35900 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT20P35900 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT20P35900 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
KRT20P35900 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT20P35900 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT20P35900 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT20P35900 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT20P35900 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
KRT20P35900 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT20P35900 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT20P35900 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
KRT20P35900 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT20P35900 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT20P35900 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
KRT20P35900 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KRT20P35900 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KRT20P35900 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
KRT20P35900 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT20P35900 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT20P35900 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.21■□□□□ 0.19
KRT20P35900 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT20P35900 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.21■□□□□ 0.19
KRT20P35900 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT20P35900 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
KRT20P35900 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT20P35900 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT20P35900 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT20P35900 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
KRT20P35900 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.21■□□□□ 0.18
KRT20P35900 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT20P35900 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
KRT20P35900 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
KRT20P35900 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
KRT20P35900 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT20P35900 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT20P35900 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT20P35900 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
KRT20P35900 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
KRT20P35900 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms