Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CLCN1P35523 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCN1P35523 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCN1P35523 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCN1P35523 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.38■□□□□ 0.69
CLCN1P35523 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCN1P35523 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.38■□□□□ 0.69
CLCN1P35523 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLCN1P35523 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCN1P35523 AL391807.1-203ENST00000604392 2365 ntBASIC19.38■□□□□ 0.69
CLCN1P35523 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCN1P35523 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CLCN1P35523 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN1P35523 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN1P35523 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CLCN1P35523 AC092053.1-201ENST00000605787 1936 ntBASIC19.37■□□□□ 0.69
CLCN1P35523 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CLCN1P35523 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLCN1P35523 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCN1P35523 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLCN1P35523 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN1P35523 AC023908.3-201ENST00000564211 3047 ntBASIC19.37■□□□□ 0.69
CLCN1P35523 LINC00167-201ENST00000530583 1419 ntBASIC19.37■□□□□ 0.69
CLCN1P35523 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN1P35523 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN1P35523 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCN1P35523 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN1P35523 STARP1-201ENST00000397973 869 ntBASIC19.37■□□□□ 0.69
CLCN1P35523 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCN1P35523 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCN1P35523 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.37■□□□□ 0.69
CLCN1P35523 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCN1P35523 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCN1P35523 AC006011.2-201ENST00000621313 1158 ntBASIC19.37■□□□□ 0.69
CLCN1P35523 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN1P35523 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCN1P35523 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.37■□□□□ 0.69
CLCN1P35523 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN1P35523 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCN1P35523 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN1P35523 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLCN1P35523 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CLCN1P35523 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCN1P35523 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLCN1P35523 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLCN1P35523 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.36■□□□□ 0.69
CLCN1P35523 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.36■□□□□ 0.69
CLCN1P35523 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLCN1P35523 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCN1P35523 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.36■□□□□ 0.69
CLCN1P35523 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCN1P35523 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 AL359258.3-201ENST00000622910 2331 ntBASIC19.36■□□□□ 0.69
CLCN1P35523 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CLCN1P35523 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLCN1P35523 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC19.36■□□□□ 0.69
CLCN1P35523 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CLCN1P35523 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN1P35523 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCN1P35523 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLCN1P35523 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCN1P35523 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCN1P35523 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLCN1P35523 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN1P35523 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms