Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC8P31273 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC8P31273 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC8P31273 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC8P31273 AC073439.1-201ENST00000624121 1774 ntBASIC18.35■□□□□ 0.53
HOXC8P31273 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HOXC8P31273 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC8P31273 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC8P31273 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC8P31273 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.35■□□□□ 0.53
HOXC8P31273 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC8P31273 HLA-H-201ENST00000383620 1096 ntBASIC18.35■□□□□ 0.53
HOXC8P31273 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC8P31273 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC8P31273 HLA-V-204ENST00000476601 1289 ntBASIC18.35■□□□□ 0.53
HOXC8P31273 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC8P31273 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXC8P31273 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.35■□□□□ 0.53
HOXC8P31273 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC8P31273 AL671710.1-201ENST00000610245 2349 ntBASIC18.35■□□□□ 0.53
HOXC8P31273 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC8P31273 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC8P31273 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC8P31273 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC8P31273 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC8P31273 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXC8P31273 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.34■□□□□ 0.53
HOXC8P31273 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXC8P31273 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HOXC8P31273 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.34■□□□□ 0.53
HOXC8P31273 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HOXC8P31273 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXC8P31273 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.34■□□□□ 0.53
HOXC8P31273 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
HOXC8P31273 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.34■□□□□ 0.53
HOXC8P31273 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.34■□□□□ 0.53
HOXC8P31273 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC8P31273 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.34■□□□□ 0.53
HOXC8P31273 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.34■□□□□ 0.53
HOXC8P31273 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.34■□□□□ 0.53
HOXC8P31273 AL138828.2-201ENST00000615812 383 ntBASIC18.34■□□□□ 0.53
HOXC8P31273 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXC8P31273 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HOXC8P31273 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.34■□□□□ 0.53
HOXC8P31273 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HOXC8P31273 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC8P31273 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
HOXC8P31273 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC8P31273 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC8P31273 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC8P31273 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.33■□□□□ 0.53
HOXC8P31273 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC8P31273 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC8P31273 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC8P31273 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.33■□□□□ 0.52
HOXC8P31273 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC8P31273 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC8P31273 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.33■□□□□ 0.52
HOXC8P31273 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.33■□□□□ 0.52
HOXC8P31273 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.33■□□□□ 0.52
HOXC8P31273 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
HOXC8P31273 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.33■□□□□ 0.52
HOXC8P31273 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC8P31273 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC8P31273 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC8P31273 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.33■□□□□ 0.52
HOXC8P31273 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXC8P31273 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC8P31273 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.33■□□□□ 0.52
HOXC8P31273 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXC8P31273 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC8P31273 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXC8P31273 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
HOXC8P31273 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HOXC8P31273 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC8P31273 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
HOXC8P31273 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXC8P31273 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HOXC8P31273 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HOXC8P31273 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.32■□□□□ 0.52
HOXC8P31273 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC8P31273 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.32■□□□□ 0.52
HOXC8P31273 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms