Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CD58P19256 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.26■□□□□ 0.51
CD58P19256 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CD58P19256 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CD58P19256 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CD58P19256 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CD58P19256 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.26■□□□□ 0.51
CD58P19256 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.26■□□□□ 0.51
CD58P19256 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.26■□□□□ 0.51
CD58P19256 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 TERC-201ENST00000602385 541 ntBASIC18.26■□□□□ 0.51
CD58P19256 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.26■□□□□ 0.51
CD58P19256 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.26■□□□□ 0.51
CD58P19256 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
CD58P19256 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CD58P19256 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.26■□□□□ 0.51
CD58P19256 AC084018.2-201ENST00000613093 2607 ntBASIC18.26■□□□□ 0.51
CD58P19256 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.26■□□□□ 0.51
CD58P19256 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.26■□□□□ 0.51
CD58P19256 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD58P19256 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.25■□□□□ 0.51
CD58P19256 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.25■□□□□ 0.51
CD58P19256 AC005915.1-201ENST00000624912 2018 ntBASIC18.25■□□□□ 0.51
CD58P19256 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD58P19256 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD58P19256 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD58P19256 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD58P19256 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD58P19256 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD58P19256 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.25■□□□□ 0.51
CD58P19256 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CD58P19256 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD58P19256 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD58P19256 AL590627.1-203ENST00000421194 1026 ntBASIC18.25■□□□□ 0.51
CD58P19256 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CD58P19256 PAWRP1-201ENST00000451083 565 ntBASIC18.25■□□□□ 0.51
CD58P19256 AC124947.2-201ENST00000547118 1133 ntBASIC18.25■□□□□ 0.51
CD58P19256 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.25■□□□□ 0.51
CD58P19256 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.25■□□□□ 0.51
CD58P19256 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.25■□□□□ 0.51
CD58P19256 AC008667.4-201ENST00000607370 168 ntBASIC18.25■□□□□ 0.51
CD58P19256 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.25■□□□□ 0.51
CD58P19256 PGM5P2-202ENST00000637225 1043 ntBASIC18.25■□□□□ 0.51
CD58P19256 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD58P19256 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CD58P19256 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.25■□□□□ 0.51
CD58P19256 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.25■□□□□ 0.51
CD58P19256 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD58P19256 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD58P19256 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.25■□□□□ 0.51
CD58P19256 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CD58P19256 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CD58P19256 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CD58P19256 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD58P19256 IL9RP2-201ENST00000423948 1312 ntBASIC18.24■□□□□ 0.51
CD58P19256 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CD58P19256 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.24■□□□□ 0.51
CD58P19256 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CD58P19256 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.24■□□□□ 0.51
CD58P19256 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.24■□□□□ 0.51
CD58P19256 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.24■□□□□ 0.51
CD58P19256 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.24■□□□□ 0.51
CD58P19256 AC108073.2-201ENST00000464002 357 ntBASIC18.24■□□□□ 0.51
CD58P19256 RNA5SP415-201ENST00000517246 115 ntBASIC18.24■□□□□ 0.51
CD58P19256 IGHV3-22-201ENST00000520721 359 ntBASIC18.24■□□□□ 0.51
CD58P19256 IGHV3-65-201ENST00000523210 341 ntBASIC18.24■□□□□ 0.51
CD58P19256 UNC93B6-202ENST00000528242 690 ntBASIC18.24■□□□□ 0.51
CD58P19256 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.24■□□□□ 0.51
CD58P19256 AC120114.3-201ENST00000611923 658 ntBASIC18.24■□□□□ 0.51
CD58P19256 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CD58P19256 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CD58P19256 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD58P19256 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms