Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ACANP16112 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 AL079307.3-201ENST00000556114 283 ntBASIC13.76□□□□□ -0.21
ACANP16112 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ACANP16112 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 FAM220BP-201ENST00000377689 816 ntBASIC13.76□□□□□ -0.21
ACANP16112 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.76□□□□□ -0.21
ACANP16112 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.76□□□□□ -0.21
ACANP16112 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.76□□□□□ -0.21
ACANP16112 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ACANP16112 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.75□□□□□ -0.21
ACANP16112 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.75□□□□□ -0.21
ACANP16112 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.75□□□□□ -0.21
ACANP16112 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ACANP16112 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.75□□□□□ -0.21
ACANP16112 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
ACANP16112 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.75□□□□□ -0.21
ACANP16112 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.75□□□□□ -0.21
ACANP16112 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ACANP16112 HLA-H-201ENST00000383620 1096 ntBASIC13.75□□□□□ -0.21
ACANP16112 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.75□□□□□ -0.21
ACANP16112 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ACANP16112 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.75□□□□□ -0.21
ACANP16112 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
ACANP16112 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
ACANP16112 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.75□□□□□ -0.21
ACANP16112 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ACANP16112 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
ACANP16112 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.75□□□□□ -0.21
ACANP16112 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.75□□□□□ -0.21
ACANP16112 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ACANP16112 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms