Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
DEFA4P12838 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.89□□□□□ -0.19
DEFA4P12838 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.89□□□□□ -0.19
DEFA4P12838 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.89□□□□□ -0.19
DEFA4P12838 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.89□□□□□ -0.19
DEFA4P12838 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
DEFA4P12838 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
DEFA4P12838 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 AC096633.1-201ENST00000422446 749 ntBASIC13.89□□□□□ -0.19
DEFA4P12838 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.89□□□□□ -0.19
DEFA4P12838 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.89□□□□□ -0.19
DEFA4P12838 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.89□□□□□ -0.19
DEFA4P12838 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.89□□□□□ -0.19
DEFA4P12838 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.89□□□□□ -0.19
DEFA4P12838 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.89□□□□□ -0.19
DEFA4P12838 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.89□□□□□ -0.19
DEFA4P12838 AL592071.1-201ENST00000611956 408 ntBASIC13.89□□□□□ -0.19
DEFA4P12838 AL121956.5-201ENST00000625261 221 ntBASIC13.89□□□□□ -0.19
DEFA4P12838 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.89□□□□□ -0.19
DEFA4P12838 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.89□□□□□ -0.19
DEFA4P12838 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
DEFA4P12838 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.89□□□□□ -0.19
DEFA4P12838 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
DEFA4P12838 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
DEFA4P12838 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.89□□□□□ -0.19
DEFA4P12838 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.89□□□□□ -0.19
DEFA4P12838 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.89□□□□□ -0.19
DEFA4P12838 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
DEFA4P12838 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
DEFA4P12838 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.88□□□□□ -0.19
DEFA4P12838 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.88□□□□□ -0.19
DEFA4P12838 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.88□□□□□ -0.19
DEFA4P12838 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
DEFA4P12838 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.88□□□□□ -0.19
DEFA4P12838 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
DEFA4P12838 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.88□□□□□ -0.19
DEFA4P12838 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.88□□□□□ -0.19
DEFA4P12838 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.88□□□□□ -0.19
DEFA4P12838 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.88□□□□□ -0.19
DEFA4P12838 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.88□□□□□ -0.19
DEFA4P12838 NTF6B-201ENST00000591913 560 ntBASIC13.88□□□□□ -0.19
DEFA4P12838 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.88□□□□□ -0.19
DEFA4P12838 AL121672.3-201ENST00000608644 468 ntBASIC13.88□□□□□ -0.19
DEFA4P12838 AL590326.2-201ENST00000625139 305 ntBASIC13.88□□□□□ -0.19
DEFA4P12838 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.88□□□□□ -0.19
DEFA4P12838 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.88□□□□□ -0.19
DEFA4P12838 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.88□□□□□ -0.19
DEFA4P12838 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.88□□□□□ -0.19
DEFA4P12838 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.88□□□□□ -0.19
DEFA4P12838 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA4P12838 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA4P12838 AL596257.1-201ENST00000641463 2694 ntBASIC13.87□□□□□ -0.19
DEFA4P12838 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA4P12838 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
DEFA4P12838 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA4P12838 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA4P12838 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA4P12838 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA4P12838 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.87□□□□□ -0.19
DEFA4P12838 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms